hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05051527/chunk_1/iprscan-20080502-05051527.nocrc
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Query sequence: KIAA1516
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00148                                                 289.7    2.2e-82   1
SM00149                                                 168.2    8.3e-46   1
SM00239                                                  48.6      8e-10   1
SM00147                                                  31.5    1.4e-07   1
SM00314                                                  26.4     0.0039   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00147    1/1     530   833 ..     1   261 []    31.5  1.4e-07
SM00148    1/1    1394  1542 ..     1   182 []   289.7  2.2e-82
SM00149    1/1    1731  1848 ..     1   119 []   168.2  8.3e-46
SM00239    1/1    1872  1970 ..     1    92 []    48.6    8e-10
SM00314    1/1    2137  2240 ..     1   102 []    26.4   0.0039

Alignments of top-scoring domains:
SM00147: domain 1 of 1, from 530 to 833: score 31.5, E = 1.4e-07
                   *->lllldpeelAeQLTlldfelFrkIepsEllgsvwgkrskkspsplap
                      l+++ pee+A  L+  +  ++r++ p ++l ++  +  ++++  + p
    KIAA1516   530    LIQF-PEEVASILMEQEQTIYRRVLPVDYLCFLTRDLGTPECQSSLP 575  

                   ..................qnleafierfNevsnwVateIlkqttlkpkkR
                     + + + +  +++++++  le+++ rfNevs+wV+  Il++ +   ++ 
    KIAA1516   576 clkasisasilttqngehNALEDLVMRFNEVSSWVTWLILTAGS--MEEK 623  

                   aevlskFIkVAkhcreLnNFnSlmAIvsaLssspIsRLkkTWeklsskyk
                    ev+s+ ++VAk c++++N+n +m+ +++L s  +   +   ++     +
    KIAA1516   624 REVFSYLVHVAKCCWNMGNYNAVMEFLAGLRSRKVLKMWQFMDQSD---I 670  

                   klfeeLeelldpserNfknYReaLkscnkspnvqppcvPflGvyLkDLtf
                    ++ +L++ + ++    ++YR+++  + + p     +vPf Gv+Lk L  
    KIAA1516   671 ETMRSLKDAMAQH-ESSCEYRKVVTRALHIP--GCKVVPFCGVFLKELCE 717  

                   idegnpdflengt...........................kglvNFeKrr
                   + +g   + +   + ++++++ +   + +++++  ++ +++gl N eK  
    KIAA1516   718 VLDGASGLMKLCPrynsqeetlefvadysgqdnflqrvgqNGLKNSEKES 767  

                   kiakilreirqlqsacqpynlkpnr..............ndiqellrasr
                    +  i + ir +    + ++ +++ +++++++++++ ++++   ++    
    KIAA1516   768 TVNSIFQVIRSCNR--SLETDEEDSpsegnssrksslkdKSRWQFIIG-- 813  

                   plevlpeeedelyelSlriEPrv<-*
                     + l++++ +++e+S +    +   
    KIAA1516   814 --DLLDSDN-DIFEQSKEYDSHG    833  

SM00148: domain 1 of 1, from 1394 to 1542: score 289.7, E = 2.2e-82
                   *->qDmdkPLshYfInsSHNsGtfkidiFPFGLDAPEKLRLPPYVTFLLR
                        +  PLs+Y+I sSHN                              
    KIAA1516  1394    KELQLPLSYYYIESSHN------------------------------ 1410 

                   FTYLtgkQlwgessvegYiqaLkaGcRcvELDcwdgpdgePviyHGhTft
                    TYLtg+Ql+gessve Y q+L +GcR vELDcwdg+dg+P+iyHGhT+t
    KIAA1516  1411 -TYLTGHQLKGESSVELYSQVLLQGCRSVELDCWDGDDGMPIIYHGHTLT 1459 

                   skikLsdVleaIKkfAFvtSpyPEFvIlSLenHcspdqQakmaqmfkeiF
                   +ki++++V+eaI ++AF++S+ P  +I+S+enHcs++qQ+kma++fk++F
    KIAA1516  1460 TKIPFKEVVEAIDRSAFINSDLP--IIISIENHCSLPQQRKMAEIFKTVF 1507 

                   gdlLytkPltsseeypgsnLPsPeqLkgKILLkgK<-*
                   g++L+tk+l+++++++ + LPsP+qL++K LLk+K   
    KIAA1516  1508 GEKLVTKFLFETDFSDDPMLPSPDQLRKKVLLKNK    1542 

SM00149: domain 1 of 1, from 1731 to 1848: score 168.2, E = 8.3e-46
                   *->lseLvsycapvkFrsfelaeekdnafyemsSfsEtkaakkllekapt
                       ++      p + + + +a  + + +y++sS++E++ ak+l +++ +
    KIAA1516  1731    RQTWEESSSPLNPTTSLSAIIRTPKCYHISSLNENA-AKRLCRRYSQ 1776 

                   dfvryNqrqLsRvYPkGtRvDSSNYnPqvfWnaGcQMVALNfQTpDkaMq
                   ++ ++++ qL+R+YP++tR+DSSN nP++fW +G+Q+VALN+QT+D+++ 
    KIAA1516  1777 KLTQHTACQLLRTYPAATRIDSSNPNPLMFWLHGIQLVALNYQTDDLPLH 1826 

                   lNqGmFraNGgCGYVLKPefLR<-*
                   lN++mF+aNGgCGYVLKP+ L+   
    KIAA1516  1827 LNAAMFEANGGCGYVLKPPVLW    1848 

SM00239: domain 1 of 1, from 1872 to 1970: score 48.6, E = 8e-10
                   *->tLtvkiisArnLp......DPYVkvs...........kTkvvkktls
                      +  ++i+s++n  ++++ + P ++v   + + ++ + +Tk + ++  
    KIAA1516  1872    VYSLTIVSGQNVCpsnsmgSPCIEVDvlgmpldschfRTKPIHRN-- 1916 

                   gfNPvWnEesetFeFevpp...s.LeieVyDk...dfiGrvtippnnahq
                   ++NP WnE   +F F v+ ++   L++ V + +++ +  + +ip      
    KIAA1516  1917 TLNPMWNE---QFLFRVHFedlVfLRFAVVENnssAVTAQRIIP------ 1957 

                   hsadglihlsell.ggrh.kl<-*
                           l+ l++g+rh +l   
    KIAA1516  1958 --------LKALKrGYRHlQL    1970 

SM00314: domain 1 of 1, from 2137 to 2240: score 26.4, E = 0.0039
                   *->dtyvlrVyvddlsavdpgqtyktlrvskrtTardViqqllekfhltd
                       ++ + V++ +     p q+ ++++++  +Ta+dViqq l k++   
    KIAA1516  2137    ESFFVQVHDVS-----PEQPRTVIKAPRVSTAQDVIQQTLCKAKYSY 2178 

                   .....edpeeYvLvevlp..........sggkErvLlddenPlqlqklwp
                   +  ++ +p++YvL+e++ +++++++++++    rvLld+e+++q+q+ w 
    KIAA1516  2179 silsnPNPSDYVLLEEVVkdttnkktttPKSSQRVLLDQECVFQAQSKWK 2228 

                   rdaksprqsslrFvLrkrdd<-*
                              +F L+ ++    
    KIAA1516  2229 GA--------GKFILKLKEQ    2240 

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