hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04422813/chunk_1/iprscan-20080502-04422813.nocrc
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Query sequence: KIAA1503
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00382                                                  42.9    4.2e-08   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00382    1/2    1834  1970 ..     1    92 []    11.0      1.8
SM00382    2/2    2445  2592 ..     1    92 []    31.9  8.6e-05

Alignments of top-scoring domains:
SM00382: domain 1 of 2, from 1834 to 1970: score 11.0, E = 1.8
                   *->pgevvllvGppGsGKTTlaralarllgpgviyidge...ggqrirla
                      +g++    Gp G+GKT +++ l + lg  vi+++++++   + +  +
    KIAA1503  1834    RGGSP--KGPAGTGKTETVKDLGKALGIYVIVVNCSeglDYKSMGRM 1878 

                   lalark..dvlllDEitslld.............................
                      + +++    +DE +++  + ++   ++ +  ++ +  ++ + + ++ 
    KIAA1503  1879 YSGLAQtgAWGCFDEFNRINIevlsvvahqilcilsalaaglthfhfdgf 1928 

                   .......vtviattn......dldpallrrrfdrrivllril<-*
                   + ++  ++ +++t+n++  +++++p +l+++f+ + ++ +     
    KIAA1503  1929 einlvwsCGIFITMNpgyagrTELPENLKSMFRPIAMVVPDS    1970 

SM00382: domain 2 of 2, from 2445 to 2592: score 31.9, E = 8.6e-05
                   *->pgevvllvGppGsGKTTlaralarllgp...gviyidge....ggqr
                        +++llvGp G+GKT +a+ +++ l+ ++ +v++++++ +  +   
    KIAA1503  2445    NQNPILLVGPVGTGKTSIAQSVLQSLPSsqwSVLVVNMSaqttSNNV 2491 

                   irlalalark.............dvlllDEitslld..............
                   + ++  +++k++++   + ++++ + ++D++++ +++  +++  +++ ++
    KIAA1503  2492 QSIIESRVEKrtkgvyvpfggksMITFMDDLNMPAKdmfgsqpplelirl 2541 

                   ...................vtviattn.dldpallrr..rfdrrivllri
                     + +   ++ ++  +  +  +++++ ++++++ +++++r++ r+ + ++
    KIAA1503  2542 widygfwydrtkqtikyirEMFLMAAMgPPGGGRTVIspRLRSRFNIINM 2591 

                   l<-*
                   +   
    KIAA1503  2592 T    2592 

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