hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04290810/chunk_1/iprscan-20080502-04290810.nocrc
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Query sequence: KIAA1495
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00307.21.fs Calponin homology (CH) domain                   47.1    5.6e-12   1
PF00307.21.ls Calponin homology (CH) domain                   49.0    1.4e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00307.21.fs   1/1     380   493 ..     1   122 []    47.1  5.6e-12
PF00307.21.ls   1/1     380   493 ..     1   122 []    49.0  1.4e-11

Alignments of top-scoring domains:
PF00307.21.fs: domain 1 of 1, from 380 to 493: score 47.1, E = 5.6e-12
                   *->sqekellrWvnsvlagypgnkdtlPippvritnfftdwlkDGlaLca
                      ++e+e +r +++ l+ + +         v   ++    l+DG++Lc+
    KIAA1495   380    REEREQIRQLRNNLESRLK---------VILPDDIGAALMDGVVLCH 417  

                   LlnklrPglidkkkv.....pslsrfdkleNlnlaldaaekeGlgiilvl
                   L+n++rP+++  ++v+++  p+ls  +++ N++++lda++k G+    +l
    KIAA1495   418 LANHIRPRSVASIHVpspavPKLSMAKCRRNVENFLDACKKLGVSQ-ERL 466  

                   idpeDivegnpdPDeklvltllwqLirrfq<-*
                     p++i e +      +v  ++++L        
    KIAA1495   467 CLPHHILEERG---LVKVGVTVQALLELPT    493  

PF00307.21.ls: domain 1 of 1, from 380 to 493: score 49.0, E = 1.4e-11
                   *->sqekellrWvnsvlagypgnkdtlPippvritnfftdwlkDGlaLca
                      ++e+e +r +++ l+ + +         v   ++    l+DG++Lc+
    KIAA1495   380    REEREQIRQLRNNLESRLK---------VILPDDIGAALMDGVVLCH 417  

                   LlnklrPglidkkkv.....pslsrfdkleNlnlaldaaekeGlgiilvl
                   L+n++rP+++  ++v+++  p+ls  +++ N++++lda++k G+    +l
    KIAA1495   418 LANHIRPRSVASIHVpspavPKLSMAKCRRNVENFLDACKKLGVSQ-ERL 466  

                   idpeDivegnpdPDeklvltllwqLirrfq<-*
                     p++i e +      +v  ++++L        
    KIAA1495   467 CLPHHILEERG---LVKVGVTVQALLELPT    493  

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