hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-04240941/chunk_1/iprscan-20080502-04240941.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1492 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00930.11.ls Dipeptidyl peptidase IV (DPP IV) N-term 592.0 5.2e-175 1 PF00930.11.fs Dipeptidyl peptidase IV (DPP IV) N-term 590.0 2e-174 1 PF00326.11.ls Prolyl oligopeptidase family 157.9 2.4e-44 1 PF00326.11.fs Prolyl oligopeptidase family 156.0 9e-44 1 PF02230.7.fs Phospholipase/Carboxylesterase 15.4 0.00072 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00930.11.ls 1/1 129 496 .. 1 419 [] 592.0 5.2e-175 PF00930.11.fs 1/1 129 496 .. 1 419 [] 590.0 2e-174 PF00326.11.fs 1/1 576 780 .. 1 228 [] 156.0 9e-44 PF00326.11.ls 1/1 576 780 .. 1 228 [] 157.9 2.4e-44 PF02230.7.fs 1/1 715 769 .. 176 236 .] 15.4 0.00072 Alignments of top-scoring domains: PF00930.11.ls: domain 1 of 1, from 129 to 496: score 592.0, E = 5.2e-175 *->SpDgkylLlatnyekiwRHSytasYyiyDletgkvtvepLppgdvee SpD+ky+Lla+++++i+++SytasY+iy+++t+ +v++L+p+ e KIAA1492 129 SPDLKYVLLAYDVKQIFHYSYTASYVIYNIHTR--EVWELNPP---E 170 neegkiqyakwSPdGnklafVrdNNLYvrelatgdgketqiTsDGksngi +e++++qya w G++l+++++NN+Y++ + ++ ++ ++Ts Gk++ i KIAA1492 171 VEDSVLQYAAWGVQGQQLIYIFENNIYYQPDIKS--SSLRLTSSGKEEII 218 fNGlaDWVYEEEvfgrnsalWWSPDgsrLAflrfDeseVpiitlpyytdd fNG+aDW YEEE ++++ a+WWSPDg+rLAfl++++s Vp++ +p++t+ KIAA1492 219 FNGIADWLYEEELLHSHIAHWWSPDGERLAFLMINDSLVPTMVIPRFTGA 268 espppleqYPevreikfYPKAGapNPtVsLfvydltdasgktvlpmdeei +YP+ ++++ YPKAG+ NPt++L+v++l +++++l e+ KIAA1492 269 -------LYPKGKQYP-YPKAGQVNPTIKLYVVNL--YGPTHTL----EL 304 vppddlsdaedyYitrVkWlvpdekrllvqwlnRdQnvldlvlcdyDtfe +ppd+++++ +yYit+VkW v+++k +v+wlnR Qn+++l++c +t + KIAA1492 305 MPPDSFKSR-EYYITMVKW-VSNTK-TVVRWLNRPQNISILTVC--ET-T 348 skgrtvvllpprehyeetsdgWvghrelhhspvflppnpslkrdgsgflw + g++ + e tsd+W++ ++ +pvf+ rdgs+f+ KIAA1492 349 T-GACSKKY------EMTSDTWLS--QQNEEPVFS-------RDGSKFFM 382 isedrdGg.G.ykHLylydldgksseecppr.ivqlTsGnWeVtsgilgv ++++++Gg+G+++H++++ ++ks+ +++++lTsGnWeV++ il++ KIAA1492 383 TVPVKQGGrGeFHHIAMFLIQSKSE----QItVRHLTSGNWEVIK-ILAY 427 DekrglvYFtateyEdsgdPgerhLYsVsldstsggepqcLTcnsgdhrC De+++++YF++te s P++r+LYs+s++ + ++ qc++cn+ +++C KIAA1492 428 DETTQKIYFLSTE--SS--PRGRQLYSASTE--GLLNRQCISCNFMKEQC 471 tyysasfSpngkyyvltysgPdtPp<-* ty++asfSp ++++l ++gP +P KIAA1492 472 TYFDASFSPMNQHFLLFCEGPRVPV 496 PF00930.11.fs: domain 1 of 1, from 129 to 496: score 590.0, E = 2e-174 *->SpDgkylLlatnyekiwRHSytasYyiyDletgkvtvepLppgdvee SpD+ky+Lla+++++i+++SytasY+iy+++t+ +v++L+p+ e KIAA1492 129 SPDLKYVLLAYDVKQIFHYSYTASYVIYNIHTR--EVWELNPP---E 170 neegkiqyakwSPdGnklafVrdNNLYvrelatgdgketqiTsDGksngi +e++++qya w G++l+++++NN+Y++ + ++ ++ ++Ts Gk++ i KIAA1492 171 VEDSVLQYAAWGVQGQQLIYIFENNIYYQPDIKS--SSLRLTSSGKEEII 218 fNGlaDWVYEEEvfgrnsalWWSPDgsrLAflrfDeseVpiitlpyytdd fNG+aDW YEEE ++++ a+WWSPDg+rLAfl++++s Vp++ +p++t+ KIAA1492 219 FNGIADWLYEEELLHSHIAHWWSPDGERLAFLMINDSLVPTMVIPRFTGA 268 espppleqYPevreikfYPKAGapNPtVsLfvydltdasgktvlpmdeei +YP+ ++++ YPKAG+ NPt++L+v++l +++++l e+ KIAA1492 269 -------LYPKGKQYP-YPKAGQVNPTIKLYVVNL--YGPTHTL----EL 304 vppddlsdaedyYitrVkWlvpdekrllvqwlnRdQnvldlvlcdyDtfe +ppd+++++ +yYit+VkW v+++k +v+wlnR Qn+++l++c +t + KIAA1492 305 MPPDSFKSR-EYYITMVKW-VSNTK-TVVRWLNRPQNISILTVC--ET-T 348 skgrtvvllpprehyeetsdgWvghrelhhspvflppnpslkrdgsgflw + g++ + e tsd+W++ ++ +pvf+ rdgs+f+ KIAA1492 349 T-GACSKKY------EMTSDTWLS--QQNEEPVFS-------RDGSKFFM 382 isedrdGg.G.ykHLylydldgksseecppr.ivqlTsGnWeVtsgilgv ++++++Gg+G+++H++++ ++ks+ +++++lTsGnWeV++ il++ KIAA1492 383 TVPVKQGGrGeFHHIAMFLIQSKSE----QItVRHLTSGNWEVIK-ILAY 427 DekrglvYFtateyEdsgdPgerhLYsVsldstsggepqcLTcnsgdhrC De+++++YF++te s P++r+LYs+s++ + ++ qc++cn+ +++C KIAA1492 428 DETTQKIYFLSTE--SS--PRGRQLYSASTE--GLLNRQCISCNFMKEQC 471 tyysasfSpngkyyvltysgPdtPp<-* ty++asfSp ++++l ++gP +P KIAA1492 472 TYFDASFSPMNQHFLLFCEGPRVPV 496 PF00326.11.fs: domain 1 of 1, from 576 to 780: score 156.0, E = 9e-44 *->psFsvwnlqlladrG.yvvavaniRGsggyGrawhdagkrdlgqnef ++ + w l d+++++va ++RGsg++G + + + r+lg +e+ KIAA1492 576 FHID-WDSVLI-DMDnVIVARFDGRGSGFQGLKILQEIHRRLGSVEV 620 dDfiaaaeyLieqgpyvDpdrlaiwGgSyGGyltgaalnkqrpdlFkaav +D+i+a+++L++ y+D+ rl i+G yGGy + ++l lFk++ KIAA1492 621 KDQITAVKFLLKLP-YIDSKRLSIFGKGYGGYIASMILK-SDEKLFKCGS 668 avvpvvDwltymldtslpyslteaeymewgnpwdeneegYrylspyspyd v+p++D+ y + + e +y++ + +e Y++ s +++++ KIAA1492 669 VVAPITDLKLYASA------FSE-RYLGMPSK---EESTYQAASVLHNVH 708 nvkaqaypplLlihGlhDdRVppaealklvaaLqalktGknpvlllifpd +k +L+ihG++D+ V++++++ l++ L+ k+G+n + ++++pd KIAA1492 709 GLK---EENILIIHGTADTKVHFQHSAELIKHLI--KAGVN-YTMQVYPD 752 eGHLSgggkprnkrlkeyarelaFllkvlggt<-* eGH + + + +++y ++l F+ ++l+ + KIAA1492 753 EGH--NVS--EKSKYHLYSTILKFFSDCLKEE 780 PF00326.11.ls: domain 1 of 1, from 576 to 780: score 157.9, E = 2.4e-44 *->psFsvwnlqlladrG.yvvavaniRGsggyGrawhdagkrdlgqnef ++ + w l d+++++va ++RGsg++G + + + r+lg +e+ KIAA1492 576 FHID-WDSVLI-DMDnVIVARFDGRGSGFQGLKILQEIHRRLGSVEV 620 dDfiaaaeyLieqgpyvDpdrlaiwGgSyGGyltgaalnkqrpdlFkaav +D+i+a+++L++ y+D+ rl i+G yGGy + ++l lFk++ KIAA1492 621 KDQITAVKFLLKLP-YIDSKRLSIFGKGYGGYIASMILK-SDEKLFKCGS 668 avvpvvDwltymldtslpyslteaeymewgnpwdeneegYrylspyspyd v+p++D+ y + + e +y++ + +e Y++ s +++++ KIAA1492 669 VVAPITDLKLYASA------FSE-RYLGMPSK---EESTYQAASVLHNVH 708 nvkaqaypplLlihGlhDdRVppaealklvaaLqalktGknpvlllifpd +k +L+ihG++D+ V++++++ l++ L+ k+G+n + ++++pd KIAA1492 709 GLK---EENILIIHGTADTKVHFQHSAELIKHLI--KAGVN-YTMQVYPD 752 eGHLSgggkprnkrlkeyarelaFllkvlggt<-* eGH + + + +++y ++l F+ ++l+ + KIAA1492 753 EGH--NVS--EKSKYHLYSTILKFFSDCLKEE 780 PF02230.7.fs: domain 1 of 1, from 715 to 769: score 15.4, E = 0.00072 *->illiHGteDpvvPlalgkaakeyLkklgnpakvefkeypgmgHsicp il iHGt D v +++++ + ++L+k+g +++++ yp+ gH + + KIAA1492 715 ILIIHGTADTKVHFQHSAELIKHLIKAGV--NYTMQVYPDEGHNVSE 759 qemqdiksFlskti<-* ++ k +l+ ti KIAA1492 760 KS----KYHLYSTI 769 //