hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-04142683/chunk_1/iprscan-20080502-04142683.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1487 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00702.16.fs haloacid dehalogenase-like hydrolase 20.5 1.6e-05 2 PF08282.2.fs haloacid dehalogenase-like hydrolase 17.5 2.2e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF08282.2.fs 1/1 274 295 .. 219 240 .. 17.5 2.2e-05 Alignments of top-scoring domains: PF08282.2.fs: domain 1 of 1, from 274 to 295: score 17.5, E = 2.2e-05 *->eviAFGDgeNDieMLelaGlgV<-* +++A+GDg ND++M+++a++g+ KIAA1487 274 MTLAIGDGANDVSMIQVADIGI 295 //