hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-04074981/chunk_1/iprscan-20080502-04074981.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1483 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00096.16.fs Zinc finger, C2H2 type 80.4 5.2e-21 4 PF00096.16.ls Zinc finger, C2H2 type 72.3 1.4e-18 4 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00096.16.fs 1/4 168 190 .. 1 24 [] 27.9 1e-05 PF00096.16.ls 1/4 168 190 .. 1 24 [] 29.9 8.2e-06 PF00096.16.fs 2/4 277 299 .. 1 24 [] 28.1 9.4e-06 PF00096.16.ls 2/4 277 299 .. 1 24 [] 30.1 7.4e-06 Alignments of top-scoring domains: PF00096.16.fs: domain 1 of 4, from 168 to 190: score 27.9, E = 1e-05 *->ykCpfdCgksFsrksnLkrHlrtH<-* y C+ Cg++F+ +s+L+ Hl++H KIAA1483 168 YACH-LCGRRFTLRSSLREHLQIH 190 PF00096.16.ls: domain 1 of 4, from 168 to 190: score 29.9, E = 8.2e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* y C+ Cg++F+ +s+L+ Hl++H KIAA1483 168 YACH-LCGRRFTLRSSLREHLQIH 190 PF00096.16.fs: domain 2 of 4, from 277 to 299: score 28.1, E = 9.4e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* y+C+ +Cg++F +ks+ + H+ +H KIAA1483 277 YECT-ICGRKFIQKSHWREHMYIH 299 PF00096.16.ls: domain 2 of 4, from 277 to 299: score 30.1, E = 7.4e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* y+C+ +Cg++F +ks+ + H+ +H KIAA1483 277 YECT-ICGRKFIQKSHWREHMYIH 299 //