hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /db/iprscan/data/Pfam.bin
Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-04025332/chunk_1/iprscan-20080502-04025332.nocrc
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Query sequence: KIAA1480
Accession: [none]
Description: [none]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
PF00135.18.fs Carboxylesterase 570.8 1.2e-168 1
PF00135.18.ls Carboxylesterase 460.6 1.8e-135 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PF00135.18.ls 1/1 1 458 [. 1 592 [] 460.6 1.8e-135
PF00135.18.fs 1/1 3 458 .. 131 592 .] 570.8 1.2e-168
Alignments of top-scoring domains:
PF00135.18.ls: domain 1 of 1, from 1 to 458: score 460.6, E = 1.8e-135
*->mllllllllllllflavvataptspedpvVeTsyvgGkvrGlrvkvd
++++ ++ G +
KIAA1480 1 ------------PRVWSPGS--------------------G----AK 11
ggnkpvyaFlGIPYAkPPvGeLRFkkPqPpepWtgvldATkygpaCpQ.n
Q+
KIAA1480 12 K----------------------------------------------QgE 15
dlgfpgfslalhvgsemwnkntgksmSEDCLYLNVytPklasenkklPVm
dl n g +ED ++ ++++ PVm
KIAA1480 16 DLA----------------DNDG---DED---------EDIRDSGAKPVM 37
VwIHGGGFqsGsassvslddydgpdlaasedVVVVtiNYRLGalGFLstg
V+IHGG +++G++ ++ dg++la++++V+V+t+NYR+G+lGFLstg
KIAA1480 38 VYIHGGSYMEGTG-----NMIDGSILASYGNVIVITLNYRVGVLGFLSTG 82
dselppppGNaGLlDQvlALrWVqeNIaaFGGDPdnVTlFGeSAGAaSVs
d+ ++ GN+GLlDQ++ALrWV eNIa+FGGDP ++T+FG + GA++Vs
KIAA1480 83 DQAAK---GNYGLLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVS 129
llllSppqsrGLFhrAIlqSGsalspwaitsppearnrakrlAkllGCpg
ll+lS +s+GLF+rAI+qSGsals+wa++++p ++++ lA ++GC+
KIAA1480 130 LLTLS-HHSEGLFQRAIIQSGSALSSWAVNYQP--VKYTSLLADKVGCNV 176
edseelveCLRkksaeelldaqwklllleefgffplfpFgPVvdGdtpda
d ++v+CLR+ksa+el++++ +++++ f PV+dGd
KIAA1480 177 LDTVDMVDCLRQKSAKELVEQDI--QPARYHVAFG-----PVIDGD---- 215
flpkdPeellkegnfnkvPlliGvtsdEGllflayvl.dp.lsadllsei
++p+dPe+l+++g+f ++++++Gv++ EGl f+ v + ++ + s
KIAA1480 216 VIPDDPEILMEQGEFLNYDIMLGVNQGEGLKFVEGVVdPEdGV----SGT 261
dnedlflellpellpgase.steklreeiadaikeeYtdd.ddnseesrr
d+++ +++ ++l+g++e++ + ++++ik++Ytd+ d++++e+rr
KIAA1480 262 DFDY-SVSNFVDNLYGYPEgK-----DTLRETIKFMYTDWaDRDNPETRR 305
dalldllsDylFvcPilrlalaraakagspvYlYrFdyrssdsfnqyrin
+ l+ l++D+++v P +++ ++ +a++gsp+Y+Y F +++
KIAA1480 306 KTLVALFTDHQWVEP-SVVTADLHARYGSPTYFYAFYHHCQ--------S 346
llwppwrgvsHgdelsYvFGnpls.k.ly....sseeeemlssrrmmryw
l++p w + Hgde++YvFG+p++++++ + ++s+ ++mls +++m+yw
KIAA1480 347 LMKPAWSDAAHGDEVPYVFGVPMVgPtDLfpcnFSKNDVMLS-AVVMTYW 395
tnFAktGnPN.............ngessglvkWppytkeeqkyylpitll
tnFAktG+PN++ +++++ +++ + +++v W +y++ +q yl+i+l+
KIAA1480 396 TNFAKTGDPNkpvpqdtkfihtkANR-FEEVAWSKYNPRDQ-LYLHIGLK 443
nitqk.lreedPrkvkcafw<-*
+++++++r+++ +afw
KIAA1480 444 PRVRDhYRATK-----VAFW 458
PF00135.18.fs: domain 1 of 1, from 3 to 458: score 570.8, E = 1.2e-168
*->VytPklasenk...................klPVmVwIHGGGFqsGs
V++P ++++++ +++++++++ ++++ PVmV+IHGG +++G+
KIAA1480 3 VWSPGSGAKKQgedladndgdededirdsgAKPVMVYIHGGSYMEGT 49
assvslddydgpdlaasedVVVVtiNYRLGalGFLstgdselppppGNaG
+ ++ dg++la++++V+V+t+NYR+G+lGFLstgd+ ++ GN+G
KIAA1480 50 G-----NMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAK---GNYG 91
LlDQvlALrWVqeNIaaFGGDPdnVTlFGeSAGAaSVsllllSppqsrGL
LlDQ++ALrWV eNIa+FGGDP ++T+FG + GA++Vsll+lS +s+GL
KIAA1480 92 LLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVSLLTLS-HHSEGL 140
FhrAIlqSGsalspwaitsppearnrakrlAkllGCpgedseelveCLRk
F+rAI+qSGsals+wa++++p ++++ lA ++GC+ d ++v+CLR+
KIAA1480 141 FQRAIIQSGSALSSWAVNYQP--VKYTSLLADKVGCNVLDTVDMVDCLRQ 188
ksaeelldaqwklllleefgffplfpFgPVvdGdtpdaflpkdPeellke
ksa+el++++ +++++ f PV+dGd ++p+dPe+l+++
KIAA1480 189 KSAKELVEQDI--QPARYHVAFG-----PVIDGD----VIPDDPEILMEQ 227
gnfnkvPlliGvtsdEGllflayvl.dp.lsadllseidnedlflellpe
g+f ++++++Gv++ EGl f+ v + ++ + s d+++ +++ +
KIAA1480 228 GEFLNYDIMLGVNQGEGLKFVEGVVdPEdGV----SGTDFDY-SVSNFVD 272
llpgase.steklreeiadaikeeYtdd.ddnseesrrdalldllsDylF
+l+g++e++ + ++++ik++Ytd+ d++++e+rr+ l+ l++D+++
KIAA1480 273 NLYGYPEgK-----DTLRETIKFMYTDWaDRDNPETRRKTLVALFTDHQW 317
vcPilrlalaraakagspvYlYrFdyrssdsfnqyrinllwppwrgvsHg
v P +++ ++ +a++gsp+Y+Y F +++ l++p w + Hg
KIAA1480 318 VEP-SVVTADLHARYGSPTYFYAFYHHCQ--------SLMKPAWSDAAHG 358
delsYvFGnpls.k.ly....sseeeemlssrrmmrywtnFAktGnPN..
de++YvFG+p++++++ + ++s+ ++mls +++m+ywtnFAktG+PN++
KIAA1480 359 DEVPYVFGVPMVgPtDLfpcnFSKNDVMLS-AVVMTYWTNFAKTGDPNkp 407
...........ngessglvkWppytkeeqkyylpitllnitqk.lreedP
+++++ +++ + +++v W +y++ +q yl+i+l++++++++r+++
KIAA1480 408 vpqdtkfihtkANR-FEEVAWSKYNPRDQ-LYLHIGLKPRVRDhYRATK- 454
rkvkcafw<-*
+afw
KIAA1480 455 ----VAFW 458
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