hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03424317/chunk_1/iprscan-20080502-03424317.nocrc
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Query sequence: KIAA1468
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     77.3    4.4e-20   6
PF02985.12.fs HEAT repeat                                     68.4    3.6e-18   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   2/6     330   366 ..     1    36 []    17.4    0.049
PF02985.12.ls   3/6     369   406 ..     1    36 []    14.2     0.46
PF02985.12.ls   6/6     767   803 ..     1    36 []    25.8  0.00014

Alignments of top-scoring domains:
PF02985.12.ls: domain 2 of 6, from 330 to 366: score 17.4, E = 0.049
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++  ellp + + +n++ pe R+ +ae+ gala++l   
    KIAA1468   330    TrVEAELLPQCWEQINHKYPERRLLVAESCGALAPYL    366  

PF02985.12.ls: domain 3 of 6, from 369 to 406: score 14.2, E = 0.46
                   *->e.ildellplllklln.DpdpeVReaAaeaLgalaevl<-*
                      e   + +l +l+++l +D+ + VRea++++Lg ++ ++   
    KIAA1468   369    EiRSSLVLSMLQQMLMeDKADLVREAVIKSLGIIMGYI    406  

PF02985.12.ls: domain 6 of 6, from 767 to 803: score 25.8, E = 0.00014
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        + ++++p+l++l +Dp+ +VR a++ a+g+++e +   
    KIAA1468   767    TlVAQRVVPALITLSSDPEISVRIATIPAFGTIMETV    803  

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