hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03374765/chunk_1/iprscan-20080502-03374765.nocrc
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Query sequence: KIAA1465
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00369                                                  83.1    3.3e-20   5
SM00082                                                  56.1    4.6e-12   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/5      89   113 ..     1    24 []    15.1      5.9
SM00369     2/5     114   137 ..     1    24 []     8.9       34
SM00369     3/5     138   161 ..     1    24 []    11.4       17
SM00369     4/5     162   185 ..     1    24 []    19.9     0.37
SM00369     5/5     186   209 ..     1    24 []    27.8   0.0015
SM00082     1/1     221   271 ..     1    55 []    56.1  4.6e-12

Alignments of top-scoring domains:
SM00369: domain 1 of 5, from 89 to 113: score 15.1, E = 5.9
                   *->LpnL.reLdLsnNqLtsLPpgaFqg<-*
                      Lp+  ++L+Ls N++t L +gaF++   
    KIAA1465    89    LPANvTTLSLSANKITVLRRGAFAD    113  

SM00369: domain 2 of 5, from 114 to 137: score 8.9, E = 34
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       ++ ++L L +N  +++ pga++    
    KIAA1465   114    VTQVTSLWLAHNEVRTVEPGALAV    137  

SM00369: domain 3 of 5, from 138 to 161: score 11.4, E = 17
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L++L+ LdLs+N ++s P   +++   
    KIAA1465   138    LSQLKNLDLSHNFISSFPWSDLRN    161  

SM00369: domain 4 of 5, from 162 to 185: score 19.9, E = 0.37
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L++L+ L  ++N+L sLP++a++    
    KIAA1465   162    LSALQLLKMNHNRLGSLPRDALGA    185  

SM00369: domain 5 of 5, from 186 to 209: score 27.8, E = 0.0015
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      Lp Lr+L+ +nN+L++L pg+F+    
    KIAA1465   186    LPDLRSLRINNNRLRTLAPGTFDA    209  

SM00082: domain 1 of 1, from 221 to 271: score 56.1, E = 4.6e-12
                   *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll
                      NPf+C C+L wL+ w    +++ l++p+ s+ CasP++l+G p+++l
    KIAA1465   221    NPFHCGCGLVWLQAWAAS-TRVSLPEPD-SIACASPPALQGVPVYRL 265  

                   lpsefsCp<-*
                   +    +C    
    KIAA1465   266 P--ALPCA    271  

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