hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03360658/chunk_1/iprscan-20080502-03360658.nocrc
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Query sequence: KIAA1464
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
SM00449                                                 161.4    9.2e-44   1
SM00757                                                  98.7    6.6e-25   1
SM00668                                                  63.1    3.6e-14   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
SM00449       1/1     101   222 ..     1   145 []   161.4  9.2e-44
SM00668       1/1     292   349 ..     1    60 []    63.1  3.6e-14
SM00757       1/1     507   609 ..     1   119 []    98.7  6.6e-25

Alignments of top-scoring domains:
SM00449: domain 1 of 1, from 101 to 222: score 161.4, E = 9.2e-44
                   *->sGkhYfEVevdtggdkghwrvGvatksvhlypfkvrrkrkggvsllG
                      +G++YfEV++ ++g++g++++G++ ++v+             ++l+G
    KIAA1464   101    CGIYYFEVKIVSKGRDGYMGIGLSAQGVN------------MNRLPG 135  

                   edkgSwgyrgdggkkyhasefgeeyglpfqepgDviGcflDleaggStis
                   +dk+S+gy+gd+g+ ++ s +g +yg++f++ gDviGc+++l +g  t +
    KIAA1464   136 WDKHSYGYHGDDGHSFCSSGTGQPYGPTFTT-GDVIGCCVNLING--TCF 182  

                   FykNGkyLgdshilaffdvtfsgpLyPavslgstdgGgesvrlnfGp.p<
                   ++kNG++Lg    +af d++++  LyP+v+l+ +   ge+v  nfG++p 
    KIAA1464   183 YTKNGHSLG----IAFTDLPAN--LYPTVGLQTP---GEIVDANFGQqP  222  

                   -*
                     
    KIAA1464     -    -    

SM00668: domain 1 of 1, from 292 to 349: score 63.1, E = 3.6e-14
                   *->efkerkrirelilkGdwdeAlewlsslkpellednsAkeleFlLrkq
                      ++k+r++i++l+l+G+++eA+e++++++p lle n+  +l+F L++ 
    KIAA1464   292    SIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNP--NLLFMLKCR 336  

                   kfiELvrvgktee<-*
                   +f+E+v+++++e    
    KIAA1464   337 QFVEMVNGTDSEV    349  

SM00757: domain 1 of 1, from 507 to 609: score 98.7, E = 6.6e-25
                   *->gkieeAlaYarellae.qpfakehekellke.dLektmaLLayedpn
                       ++e+++ ++rel+a ++++++e  k+l + ++L+++++LLay+dp 
    KIAA1464   507    AATERIILFGRELQALsEQLGREYGKNLAHTeMLQDAFSLLAYSDP- 552  

                   vnaqslklepspykelLspsyikkqrekvaeevNsaiLelllgksseksl
                           +++p++  L+p     qre v++++NsaiLe++ ++++    
    KIAA1464   553 --------WSCPVGQQLDPI----QREPVCAALNSAILESQ-NLPK---- 585  

                   espLerllkaglvalktlsekggv<-*
                   ++pL+ +l +   +l ++++ g +   
    KIAA1464   586 QPPLMLALGQASECLRLMARAGLG    609  

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