hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03204397/chunk_1/iprscan-20080502-03204397.nocrc
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Query sequence: KIAA1455
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00181                                                 125.3    6.5e-33   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00181    1/8     268   296 ..     1    32 []    20.1     0.31
SM00181    2/8     299   327 ..     1    32 []     7.5       55
SM00181    3/8     332   361 ..     1    32 []    11.7       24
SM00181    4/8     364   393 ..     1    32 []    20.8     0.19
SM00181    5/8     398   428 ..     1    32 []    15.2      9.6
SM00181    6/8     431   459 ..     1    32 []    16.2      4.8
SM00181    7/8     462   490 ..     1    32 []    13.3       17
SM00181    8/8     493   525 ..     1    32 []    20.6     0.21

Alignments of top-scoring domains:
SM00181: domain 1 of 8, from 268 to 296: score 20.1, E = 0.31
                   *->eCa.pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                      eC + C+ +     G+C+s tC+C  pG+ g+ C    
    KIAA1455   268    ECPrNCHGN-----GECVSGTChCF-PGFLGpDCS    296  

SM00181: domain 2 of 8, from 299 to 327: score 7.5, E = 55
                   *->eCa.pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                       C   Cs +     G+    +C C   G++g+ C    
    KIAA1455   299    ACPvLCSGN-----GQYSKGRClCF-SGWKGtECD    327  

SM00181: domain 3 of 8, from 332 to 361: score 11.7, E = 24
                   *->eCa..pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                       C ++ C+       G+Ci  +C C   Gy+g++Ce   
    KIAA1455   332    QCIdpQCGGR-----GICIMGSCaCN-SGYKGeSCE    361  

SM00181: domain 4 of 8, from 364 to 393: score 20.8, E = 0.19
                   *->eCa..pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                      +C +++Csn+     G+Ci  +C+C  pG+ g++Ce   
    KIAA1455   364    DCIdpGCSNH-----GVCIHGEChCS-PGWGGsNCE    393  

SM00181: domain 5 of 8, from 398 to 428: score 15.2, E = 9.6
                   *->eCa.pCsnGgtEqnGtCi..sytC.CpgpGytg.rCe<-*
                       C + Cs +     Gt + +s +C+C  p +tg+ C    
    KIAA1455   398    MCPdQCSGH-----GTYLqeSGSCtCD-PNWTGpDCS    428  

SM00181: domain 6 of 8, from 431 to 459: score 16.2, E = 4.8
                   *->eCa.pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                       C+ +C+ +     G+C + tC+C  +G+tg+ C    
    KIAA1455   431    ICSvDCGSH-----GVCMGGTCrCE-EGWTGpACN    459  

SM00181: domain 7 of 8, from 462 to 490: score 13.3, E = 17
                   *->eCa.pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                       C++ C ++     GtC   +C+C  +G+ g++C    
    KIAA1455   462    ACHpRCAEH-----GTCKDGKCeCS-QGWNGeHCT    490  

SM00181: domain 8 of 8, from 493 to 525: score 20.6, E = 0.21
                   *->eCa.pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-*
                       C + C  +     G+C+ + ++++C C+ pG++g  C    
    KIAA1455   493    GCPgLCNSN-----GRCTldqnGWHCvCQ-PGWRGaGCD    525  

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