# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01641b.fasta.nr -Q ../query/KIAA1439.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1439, 561 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7808745 sequences Expectation_n fit: rho(ln(x))= 6.6352+/-0.000209; mu= 6.5081+/- 0.012 mean_var=160.1814+/-30.839, 0's: 45 Z-trim: 70 B-trim: 18 in 1/65 Lambda= 0.101337 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|194388996|dbj|BAG61515.1| unnamed protein produ ( 554) 3587 536.4 8.1e-150 gi|148698959|gb|EDL30906.1| nuclear factor I/A, is ( 540) 3561 532.6 1.1e-148 gi|14194959|sp|Q12857.2|NFIA_HUMAN RecName: Full=N ( 509) 3501 523.8 4.7e-146 gi|2506926|sp|P09414.2|NFIA_RAT RecName: Full=Nucl ( 509) 3497 523.2 7e-146 gi|194387876|dbj|BAG61351.1| unnamed protein produ ( 509) 3493 522.6 1.1e-145 gi|17225433|gb|AAL37399.1|AF326553_1 NfiA-1 protei ( 509) 3484 521.3 2.6e-145 gi|1698530|gb|AAB49928.1| DNA binding protein NFI- ( 508) 3477 520.3 5.3e-145 gi|148698958|gb|EDL30905.1| nuclear factor I/A, is ( 510) 3472 519.6 8.8e-145 gi|63664|emb|CAA48255.1| nuclear factor I-A [Gallu ( 509) 3470 519.3 1.1e-144 gi|1334215|emb|CAA31565.1| unnamed protein product ( 505) 3467 518.8 1.5e-144 gi|220523|dbj|BAA14205.1| NFI-B protein [Mus muscu ( 528) 3464 518.4 2e-144 gi|73956374|ref|XP_536691.2| PREDICTED: similar to ( 507) 3437 514.4 3.1e-143 gi|109005681|ref|XP_001084362.1| PREDICTED: simila ( 501) 3436 514.3 3.4e-143 gi|55959923|emb|CAI13083.1| nuclear factor I/A [Ho ( 532) 3436 514.3 3.5e-143 gi|6650640|gb|AAF21949.1|AF112455_1 nuclear factor ( 532) 3432 513.7 5.2e-143 gi|220521|dbj|BAA14204.1| NFI-B protein [Mus muscu ( 501) 3419 511.8 1.9e-142 gi|14194972|sp|Q02780.1|NFIA_MOUSE RecName: Full=N ( 532) 3419 511.8 2e-142 gi|194387784|dbj|BAG61305.1| unnamed protein produ ( 501) 3407 510.0 6.3e-142 gi|74228188|dbj|BAE23974.1| unnamed protein produc ( 532) 3406 509.9 7.3e-142 gi|194211268|ref|XP_001918154.1| PREDICTED: simila ( 510) 3388 507.3 4.4e-141 gi|126306019|ref|XP_001381014.1| PREDICTED: simila ( 696) 3376 505.7 1.8e-140 gi|109005690|ref|XP_001084128.1| PREDICTED: simila ( 497) 3366 504.1 4e-140 gi|114556860|ref|XP_001157491.1| PREDICTED: hypoth ( 511) 3342 500.6 4.7e-139 gi|109005693|ref|XP_001084007.1| PREDICTED: simila ( 497) 3332 499.1 1.3e-138 gi|114556862|ref|XP_001157438.1| PREDICTED: hypoth ( 511) 3321 497.5 3.9e-138 gi|18490343|gb|AAH22264.1| Nuclear factor I/A [Hom ( 498) 3256 488.0 2.8e-135 gi|1488643|emb|CAA58996.1| transcription factor NF ( 498) 3252 487.4 4.2e-135 gi|55732613|emb|CAH93006.1| hypothetical protein [ ( 498) 3250 487.1 5.1e-135 gi|94733059|emb|CAK05017.1| novel protein similar ( 507) 3246 486.5 7.8e-135 gi|123122552|emb|CAM26612.1| nuclear factor I\/A [ ( 498) 3239 485.5 1.6e-134 gi|63668|emb|CAA48257.1| nuclear factor I-A4 [Gall ( 498) 3228 483.9 4.8e-134 gi|109005684|ref|XP_001083899.1| PREDICTED: simila ( 490) 3191 478.5 2e-132 gi|149044532|gb|EDL97791.1| rCG53509, isoform CRA_ ( 521) 3187 477.9 3.1e-132 gi|81674457|gb|AAI09483.1| Nuclear factor I/A [Bos ( 462) 3167 474.9 2.2e-131 gi|4433294|dbj|BAA20909.1| NFI-B protein [Mus musc ( 452) 3097 464.7 2.6e-128 gi|49903602|gb|AAH75702.1| Nfia protein [Mus muscu ( 492) 3072 461.1 3.5e-127 gi|114556850|ref|XP_001157608.1| PREDICTED: hypoth ( 527) 2451 370.3 7.8e-100 gi|109123610|ref|XP_001110618.1| PREDICTED: nuclea ( 507) 2431 367.4 5.7e-99 gi|14195678|sp|Q14938.2|NFIX_HUMAN RecName: Full=N ( 502) 2405 363.6 8e-98 gi|73986440|ref|XP_542036.2| PREDICTED: similar to ( 501) 2370 358.4 2.8e-96 gi|119604744|gb|EAW84338.1| nuclear factor I/X (CC ( 498) 2362 357.3 6.2e-96 gi|194379844|dbj|BAG58274.1| unnamed protein produ ( 510) 2346 354.9 3.2e-95 gi|60422798|gb|AAH90626.1| Nfix protein [Mus muscu ( 507) 2343 354.5 4.3e-95 gi|126517474|ref|NP_001075450.1| nuclear factor I/ ( 494) 2339 353.9 6.3e-95 gi|32130433|sp|P70257.2|NFIX_MOUSE RecName: Full=N ( 488) 2322 351.4 3.5e-94 gi|119604745|gb|EAW84339.1| nuclear factor I/X (CC ( 506) 2317 350.7 6e-94 gi|1041038|dbj|BAA11206.1| NFI-A4 [Rattus norvegic ( 357) 2282 345.4 1.6e-92 gi|189515070|ref|XP_683335.3| PREDICTED: similar t ( 529) 2271 344.0 6.5e-92 gi|220525|dbj|BAA14206.1| NFI-B protein [Mus muscu ( 378) 2210 334.9 2.5e-89 gi|55959919|emb|CAI13079.1| nuclear factor I/A [Ho ( 466) 2184 331.2 4e-88 >>gi|194388996|dbj|BAG61515.1| unnamed protein product [ (554 aa) initn: 3587 init1: 3587 opt: 3587 Z-score: 2845.9 bits: 536.4 E(): 8.1e-150 Smith-Waterman score: 3587; 99.238% identity (99.429% similar) in 525 aa overlap (37-561:30-554) 10 20 30 40 50 60 KIAA14 IFFSPPFSLSLSLSLPLSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHP :. :::::::::::::::::::::::::: gi|194 MQMCRPASSSVLYVPTRWPGGCGATWQSCPSPPPRRTRIPQRPAVMYSPLCLTQDEFHP 10 20 30 40 50 70 80 90 100 110 120 KIAA14 FIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASR 60 70 80 90 100 110 130 140 150 160 170 180 KIAA14 LLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMV 120 130 140 150 160 170 190 200 210 220 230 240 KIAA14 ILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESP 180 190 200 210 220 230 250 260 270 280 290 300 KIAA14 SQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSY 240 250 260 270 280 290 310 320 330 340 350 360 KIAA14 YSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVE ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|194 YSMSPGAMRRSLPSTSSTSPTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVE 300 310 320 330 340 350 370 380 390 400 410 420 KIAA14 PGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSP 360 370 380 390 400 410 430 440 450 460 470 480 KIAA14 IIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPT 420 430 440 450 460 470 490 500 510 520 530 540 KIAA14 PMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDP 480 490 500 510 520 530 550 560 KIAA14 SFVNIPQQTQSWYLG ::::::::::::::: gi|194 SFVNIPQQTQSWYLG 540 550 >>gi|148698959|gb|EDL30906.1| nuclear factor I/A, isofor (540 aa) initn: 3542 init1: 3542 opt: 3561 Z-score: 2825.5 bits: 532.6 E(): 1.1e-148 Smith-Waterman score: 3561; 95.948% identity (97.790% similar) in 543 aa overlap (19-561:1-540) 10 20 30 40 50 60 KIAA14 TQEAGLIFFSPPFSLSLSLSLPLSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLT :: ::: .: :.. : . ::.: :.:::::::::::: gi|148 LSPPLSPSR-THTHAHLQPAH--RRARTPRRPAVMYSPLCLT 10 20 30 70 80 90 100 110 120 KIAA14 QDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVK 40 50 60 70 80 90 130 140 150 160 170 180 KIAA14 QKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA14 LDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADS 160 170 180 190 200 210 250 260 270 280 290 300 KIAA14 SQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSD ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQSESPSQPSEADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA14 LESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSS 280 290 300 310 320 330 370 380 390 400 410 420 KIAA14 GWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTL ::::::::.:::.::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GWHEVEPGLPSPSTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTL 340 350 360 370 380 390 430 440 450 460 470 480 KIAA14 HFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 400 410 420 430 440 450 490 500 510 520 530 540 KIAA14 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVS ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|148 NPFLPTPMLPPPPPPPMARPVPLPMPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVS 460 470 480 490 500 510 550 560 KIAA14 VGPRDPSFVNIPQQTQSWYLG ::::::::::::::::::::: gi|148 VGPRDPSFVNIPQQTQSWYLG 520 530 540 >>gi|14194959|sp|Q12857.2|NFIA_HUMAN RecName: Full=Nucle (509 aa) initn: 3501 init1: 3501 opt: 3501 Z-score: 2778.4 bits: 523.8 E(): 4.7e-146 Smith-Waterman score: 3501; 100.000% identity (100.000% similar) in 509 aa overlap (53-561:1-509) 30 40 50 60 70 80 KIAA14 LSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTW :::::::::::::::::::::::::::::: gi|141 MYSPLCLTQDEFHPFIEALLPHVRAFAYTW 10 20 30 90 100 110 120 130 140 KIAA14 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|141 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 >>gi|2506926|sp|P09414.2|NFIA_RAT RecName: Full=Nuclear (509 aa) initn: 3497 init1: 3497 opt: 3497 Z-score: 2775.2 bits: 523.2 E(): 7e-146 Smith-Waterman score: 3497; 99.804% identity (100.000% similar) in 509 aa overlap (53-561:1-509) 30 40 50 60 70 80 KIAA14 LSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTW :::::::::::::::::::::::::::::: gi|250 MYSPLCLTQDEFHPFIEALLPHVRAFAYTW 10 20 30 90 100 110 120 130 140 KIAA14 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 LPMPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 >>gi|194387876|dbj|BAG61351.1| unnamed protein product [ (509 aa) initn: 3493 init1: 3493 opt: 3493 Z-score: 2772.1 bits: 522.6 E(): 1.1e-145 Smith-Waterman score: 3493; 99.804% identity (100.000% similar) in 509 aa overlap (53-561:1-509) 30 40 50 60 70 80 KIAA14 LSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTW :::::::::::::::::::::::::::::: gi|194 MYSPLCLTQDEFHPFIEALLPHVRAFAYTW 10 20 30 90 100 110 120 130 140 KIAA14 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|194 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTSPNFSLSDLESSSYYSMSPGAMRRSLPSTS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 >>gi|17225433|gb|AAL37399.1|AF326553_1 NfiA-1 protein [M (509 aa) initn: 3484 init1: 3484 opt: 3484 Z-score: 2765.0 bits: 521.3 E(): 2.6e-145 Smith-Waterman score: 3484; 99.214% identity (100.000% similar) in 509 aa overlap (53-561:1-509) 30 40 50 60 70 80 KIAA14 LSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTW :::::::::::::::::::::::::::::: gi|172 MYSPLCLTQDEFHPFIEALLPHVRAFAYTW 10 20 30 90 100 110 120 130 140 KIAA14 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|172 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSEADIKDQPENGH 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG ::::::::::::::::::::::::::::::::::::::::::::::.:::.::::::::: gi|172 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGLPSPSTLKKSEKSG 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 LPMPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 >>gi|1698530|gb|AAB49928.1| DNA binding protein NFI-A (508 aa) initn: 3477 init1: 3477 opt: 3477 Z-score: 2759.4 bits: 520.3 E(): 5.3e-145 Smith-Waterman score: 3477; 99.213% identity (100.000% similar) in 508 aa overlap (54-561:1-508) 30 40 50 60 70 80 KIAA14 SLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTWF :::::::::::::::::::::::::::::: gi|169 YSPLCLTQDEFHPFIEALLPHVRAFAYTWF 10 20 30 90 100 110 120 130 140 KIAA14 NLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 NLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDF 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 VLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 VLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLV 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 KSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGHL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|169 KSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSEADIKDQPENGHL 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 GFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 GFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 TSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGF :::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::: gi|169 TSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGLPSPSTLKKSEKSGF 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 SSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 SSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYH 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 PQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 PQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPL 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 PVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 PMPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 >>gi|148698958|gb|EDL30905.1| nuclear factor I/A, isofor (510 aa) initn: 2216 init1: 2216 opt: 3472 Z-score: 2755.5 bits: 519.6 E(): 8.8e-145 Smith-Waterman score: 3472; 99.020% identity (99.804% similar) in 510 aa overlap (53-561:1-510) 30 40 50 60 70 80 KIAA14 LSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTW :::::::::::::::::::::::::::::: gi|148 MYSPLCLTQDEFHPFIEALLPHVRAFAYTW 10 20 30 90 100 110 120 130 140 KIAA14 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAA-DSSQSESPSQPSDADIKDQPENG :::::::::::::::::::::::::::::::::::: ::::::::::::.:::::::::: gi|148 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAAADSSQSESPSQPSEADIKDQPENG 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 HLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPST 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 SSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKS :::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::: gi|148 SSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGLPSPSTLKKSEKS 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 GFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIR 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 YHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPV 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 PLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PLPMPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 510 >>gi|63664|emb|CAA48255.1| nuclear factor I-A [Gallus ga (509 aa) initn: 3470 init1: 3470 opt: 3470 Z-score: 2753.9 bits: 519.3 E(): 1.1e-144 Smith-Waterman score: 3470; 98.821% identity (100.000% similar) in 509 aa overlap (53-561:1-509) 30 40 50 60 70 80 KIAA14 LSLFLLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTW :::::::::::::::::::::::::::::: gi|636 MYSPLCLTQDEFHPFIEALLPHVRAFAYTW 10 20 30 90 100 110 120 130 140 KIAA14 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYRED ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|636 FNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEFRED 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|636 FVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGH ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|636 VKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSEADIKDQPENGH 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|636 LGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 STSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSG :::::::.:::::::::::::::::.:::::::::::::::::::::::::.:::::::: gi|636 STSSTKRIKSVEDEMDSPGEEPFYTSQGRSPGSGSQSSGWHEVEPGMPSPTALKKSEKSG 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|636 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|636 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 LPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|636 LPVPDTKPPTTSTEGGATSPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 >>gi|1334215|emb|CAA31565.1| unnamed protein product [Ra (505 aa) initn: 3467 init1: 3467 opt: 3467 Z-score: 2751.6 bits: 518.8 E(): 1.5e-144 Smith-Waterman score: 3467; 99.802% identity (100.000% similar) in 505 aa overlap (57-561:1-505) 30 40 50 60 70 80 KIAA14 LLSHPHSRTPPNRTPRRTRIPQRPAVMYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQ :::::::::::::::::::::::::::::: gi|133 LCLTQDEFHPFIEALLPHVRAFAYTWFNLQ 10 20 30 90 100 110 120 130 140 KIAA14 ARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 ARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLT 40 50 60 70 80 90 150 160 170 180 190 200 KIAA14 VTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 VTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSP 100 110 120 130 140 150 210 220 230 240 250 260 KIAA14 QCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGHLGFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 QCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGHLGFQ 160 170 180 190 200 210 270 280 290 300 310 320 KIAA14 DSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 DSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSS 220 230 240 250 260 270 330 340 350 360 370 380 KIAA14 TKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 TKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSP 280 290 300 310 320 330 390 400 410 420 430 440 KIAA14 SPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 SPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQE 340 350 360 370 380 390 450 460 470 480 490 500 KIAA14 TLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|133 TLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPMP 400 410 420 430 440 450 510 520 530 540 550 560 KIAA14 DTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 DTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG 460 470 480 490 500 561 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 18:33:21 2009 done: Wed Mar 4 18:37:11 2009 Total Scan time: 1467.560 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]