hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02304641/chunk_1/iprscan-20080502-02304641.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1425
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05499.2.fs DNA methyltransferase 1-associated protein 1   413.8   1.2e-122   1
PF05499.2.ls DNA methyltransferase 1-associated protein 1   415.6   6.4e-122   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05499.2.fs   1/1     271   435 ..     1   181 []   413.8 1.2e-122
PF05499.2.ls   1/1     271   435 ..     1   181 []   415.6 6.4e-122

Alignments of top-scoring domains:
PF05499.2.fs: domain 1 of 1, from 271 to 435: score 413.8, E = 1.2e-122
                   *->EEedLlaELrkIEaRKKEREkkaqDLQKLIsaadQQpEHASptAegr
                      EEe+Ll+ELrkIEaRKKEREk++qDLQKLI+aad       +tAe+r
    KIAA1425   271    EEEYLLQELRKIEARKKEREKRSQDLQKLITAAD-------TTAEQR 310  

                   kgekkakkKkvfqkkeasksttattaFNPldIsvtgikFsdfkSSGvsLR
                   ++e+ka+kKk++qkkea+k+++++ta         gikF+dfkS+Gv+LR
    KIAA1425   311 RTERKAPKKKLPQKKEAEKPAVPETA---------GIKFPDFKSAGVTLR 351  

                   sQrMKLPtniGQkKvKaLEqvLeelkvelaPvptEeivktFNeLRSdlvL
                   sQrMKLP+++GQkK+KaLEq+L+el+vel+P+ptEe+v++FNeLRSdlvL
    KIAA1425   352 SQRMKLPSSVGQKKIKALEQMLLELGVELSPTPTEELVHMFNELRSDLVL 401  

                   lqELksAlatceYELesLrhryealarGkdLdip<-*
                   l+ELk+A+a+ceYEL++Lrhr+ealar+++L+ p   
    KIAA1425   402 LYELKQACANCEYELQMLRHRHEALARAGVLGGP    435  

PF05499.2.ls: domain 1 of 1, from 271 to 435: score 415.6, E = 6.4e-122
                   *->EEedLlaELrkIEaRKKEREkkaqDLQKLIsaadQQpEHASptAegr
                      EEe+Ll+ELrkIEaRKKEREk++qDLQKLI+aad       +tAe+r
    KIAA1425   271    EEEYLLQELRKIEARKKEREKRSQDLQKLITAAD-------TTAEQR 310  

                   kgekkakkKkvfqkkeasksttattaFNPldIsvtgikFsdfkSSGvsLR
                   ++e+ka+kKk++qkkea+k+++++ta         gikF+dfkS+Gv+LR
    KIAA1425   311 RTERKAPKKKLPQKKEAEKPAVPETA---------GIKFPDFKSAGVTLR 351  

                   sQrMKLPtniGQkKvKaLEqvLeelkvelaPvptEeivktFNeLRSdlvL
                   sQrMKLP+++GQkK+KaLEq+L+el+vel+P+ptEe+v++FNeLRSdlvL
    KIAA1425   352 SQRMKLPSSVGQKKIKALEQMLLELGVELSPTPTEELVHMFNELRSDLVL 401  

                   lqELksAlatceYELesLrhryealarGkdLdip<-*
                   l+ELk+A+a+ceYEL++Lrhr+ealar+++L+ p   
    KIAA1425   402 LYELKQACANCEYELQMLRHRHEALARAGVLGGP    435  

//