hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02202031/chunk_1/iprscan-20080502-02202031.nocrc
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Query sequence: KIAA1419
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00033                                                  56.4    3.6e-12   1
SM00382                                                  33.2    3.4e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00033    1/1     119   222 ..     1   100 []    56.4  3.6e-12
SM00382    1/1    2125  2279 ..     1    92 []    33.2  3.4e-05

Alignments of top-scoring domains:
SM00033: domain 1 of 1, from 119 to 222: score 56.4, E = 3.6e-12
                   *->eeeallrWinsll.......kvtnfssdlkDGvvLckLlnslsPags
                        ++++ W+n  l ++++++ + ++++d  DGv+L++ + +++  ++
    KIAA1419   119    DTQIYTDWANHYLaksghkrLIRDLQQDVTDGVLLAQIIQVVAN-EK 164  

                   vdkkk.....rfkkleNinlalsfaeklgafLGvgkvvlfdpeDlvegne
                   ++ +++ +++r++ +eNi ++l+f+ ++     + + +++ +e++  g  
    KIAA1419   165 IEDINgcpknRSQMIENIDACLNFLAAK-----GINIQGLSAEEIRNG-- 207  

                   nkklilgviwtLirl<-*
                   n k ilg+++ L+r+   
    KIAA1419   208 NLKAILGLFFSLSRY    222  

SM00382: domain 1 of 1, from 2125 to 2279: score 33.2, E = 3.4e-05
                   *->pgevvllvGppGsGKTTlaralarllgp.........gviyidge..
                       +++++l Gp+G+GKT la+ l  ++  +++++ +++ +  ++ +++
    KIAA1419  2125    EHRRIILSGPSGTGKTYLANRLSEYIVLregreltdgVIATFNVDhk 2171 

                   ggqrirlalalark............dvlllDEitslld...........
                   + +++r+ l  +  + ++ ++  + + v++lD +++   +++  +++++ 
    KIAA1419  2172 SSKELRQYLSNLADqcnsennavdmpLVIILDNLHHVSSlgeifngllnc 2221 

                   ............................vtviattn.dldpallrrrfdr
                   + ++     +  ++  ++  +++++++ + v++++++++ ++ l r ++r
    KIAA1419  2222 kyhkcpyiigtmnqatsstpnlqlhhnfRWVLCANHtEPVKGFLGRFLRR 2271 

                   rivllril<-*
                   +++   i    
    KIAA1419  2272 KLMETEIS    2279 

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