hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01473308/chunk_1/iprscan-20080502-01473308.nocrc
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Query sequence: KIAA1401
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00785                                                 126.1    3.9e-33   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00785    1/1     277   358 ..     1    89 []   126.1  3.9e-33

Alignments of top-scoring domains:
SM00785: domain 1 of 1, from 277 to 358: score 126.1, E = 3.9e-33
                   *->EilnLlRflsvmkprplsWRdqHpYlLadrveditnpeelieedpkv
                      E+  LlR l+++k+++l++Rd+++Yl a  v+++++     ee+++v
    KIAA1401   277    EAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPS-----EENNLV 318  

                   drkklvvyGyVRGtgLnanrlVHIPGlGDFqiskIealpDPc<-*
                   ++  l+++GyVRG+ Ln+nrl HI G+GDFq+++I+a+ DP+   
    KIAA1401   319 GT--LKISGYVRGQTLNVNRLLHIVGYGDFQMKQIDAPGDPF    358  

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