# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hk07377.fasta.nr -Q ../query/KIAA1399.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1399, 452 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7817735 sequences Expectation_n fit: rho(ln(x))= 5.7787+/-0.000198; mu= 9.6040+/- 0.011 mean_var=113.2872+/-21.590, 0's: 40 Z-trim: 62 B-trim: 22 in 1/65 Lambda= 0.120499 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|59798475|sp|Q9P2E8.2|MARH4_HUMAN RecName: Full= ( 410) 3001 532.3 8.2e-149 gi|114583204|ref|XP_526023.2| PREDICTED: membrane- ( 411) 2989 530.2 3.5e-148 gi|74005706|ref|XP_545636.2| PREDICTED: similar to ( 523) 2847 505.7 1.1e-140 gi|149710122|ref|XP_001490009.1| PREDICTED: membra ( 411) 2765 491.3 1.9e-136 gi|194664312|ref|XP_001789546.1| PREDICTED: simila ( 409) 2751 488.9 1e-135 gi|125987840|sp|Q80TE3.3|MARH4_MOUSE RecName: Full ( 409) 2662 473.4 4.5e-131 gi|109486240|ref|XP_001074008.1| PREDICTED: simila ( 409) 2648 471.0 2.4e-130 gi|29179408|gb|AAH48793.1| MARCH4 protein [Homo sa ( 357) 2553 454.4 2.1e-125 gi|126337860|ref|XP_001363894.1| PREDICTED: simila ( 419) 2535 451.3 2e-124 gi|149234074|ref|XP_001477280.1| PREDICTED: simila ( 412) 2110 377.4 3.5e-102 gi|118093789|ref|XP_422071.2| PREDICTED: similar t ( 403) 1747 314.3 3.4e-83 gi|123914442|sp|Q0P496.1|MARH4_DANRE RecName: Full ( 421) 1269 231.2 3.7e-58 gi|183985994|gb|AAI66307.1| LOC100127869 protein [ ( 332) 1217 222.1 1.6e-55 gi|126343808|ref|XP_001364464.1| PREDICTED: simila ( 346) 1198 218.8 1.7e-54 gi|150445755|dbj|BAF68986.1| membrane-associated R ( 346) 1197 218.6 1.9e-54 gi|119617470|gb|EAW97064.1| membrane-associated ri ( 278) 1195 218.2 2e-54 gi|149261559|ref|XP_001473620.1| PREDICTED: hypoth ( 308) 1194 218.1 2.5e-54 gi|74759533|sp|Q86YJ5.2|MARH9_HUMAN RecName: Full= ( 346) 1194 218.1 2.7e-54 gi|123787316|sp|Q3TZ87.1|MARH9_MOUSE RecName: Full ( 348) 1194 218.1 2.7e-54 gi|29791835|gb|AAH50397.1| MARCH9 protein [Homo sa ( 489) 1194 218.3 3.4e-54 gi|194212314|ref|XP_001488841.2| PREDICTED: simila ( 255) 1190 217.3 3.5e-54 gi|76618798|ref|XP_872323.1| PREDICTED: similar to ( 346) 1188 217.1 5.5e-54 gi|125852404|ref|XP_001339845.1| PREDICTED: simila ( 342) 1181 215.8 1.3e-53 gi|148692517|gb|EDL24464.1| mCG5187 [Mus musculus] ( 245) 1151 210.5 3.8e-52 gi|55963380|emb|CAI11866.1| novel protein [Danio r ( 378) 1149 210.3 6.5e-52 gi|47220684|emb|CAG11753.1| unnamed protein produc ( 201) 1143 209.0 8.6e-52 gi|148667866|gb|EDL00283.1| mCG146944 [Mus musculu ( 171) 1134 207.4 2.3e-51 gi|33990634|gb|AAH56494.1| March4 protein [Mus mus ( 185) 1114 203.9 2.7e-50 gi|49522196|gb|AAH74436.1| LOC443709 protein [Xeno ( 226) 1046 192.2 1.1e-46 gi|47226326|emb|CAG09294.1| unnamed protein produc ( 257) 1046 192.3 1.2e-46 gi|160773653|gb|AAI55517.1| LOC100127869 protein [ ( 228) 1041 191.3 2e-46 gi|73968558|ref|XP_538253.2| PREDICTED: similar to ( 257) 1035 190.3 4.6e-46 gi|189523791|ref|XP_001920168.1| PREDICTED: simila ( 261) 999 184.1 3.5e-44 gi|126321063|ref|XP_001373305.1| PREDICTED: hypoth ( 439) 987 182.2 2.2e-43 gi|194676651|ref|XP_001250236.2| PREDICTED: simila ( 400) 981 181.1 4.2e-43 gi|190359880|sp|Q8CBH7.2|MARHB_MOUSE RecName: Full ( 400) 980 181.0 4.7e-43 gi|190359826|sp|A6P320.1|MARHB_RAT RecName: Full=E ( 398) 979 180.8 5.3e-43 gi|161760669|ref|NP_001095298.1| membrane-associat ( 398) 977 180.5 6.7e-43 gi|190359893|sp|A6NNE9.3|MARHB_HUMAN RecName: Full ( 402) 975 180.1 8.6e-43 gi|149026473|gb|EDL82623.1| similar to hypothetica ( 361) 928 171.9 2.3e-40 gi|148676958|gb|EDL08905.1| mCG119668 [Mus musculu ( 363) 928 171.9 2.3e-40 gi|47228168|emb|CAF97797.1| unnamed protein produc ( 175) 898 166.4 5.2e-39 gi|125806915|ref|XP_001338632.1| PREDICTED: im:714 ( 339) 897 166.5 9.2e-39 gi|118086562|ref|XP_419001.2| PREDICTED: similar t ( 395) 890 165.3 2.4e-38 gi|109076788|ref|XP_001109958.1| PREDICTED: simila ( 246) 880 163.4 5.7e-38 gi|18044133|gb|AAH19560.1| March9 protein [Mus mus ( 213) 877 162.8 7.4e-38 gi|73954397|ref|XP_536522.2| PREDICTED: similar to ( 309) 877 163.0 9.6e-38 gi|149412818|ref|XP_001510994.1| PREDICTED: simila ( 280) 875 162.6 1.1e-37 gi|83012691|ref|XP_919008.1| PREDICTED: similar to ( 144) 854 158.6 9.1e-37 gi|148669180|gb|EDL01150.1| mCG51621 [Mus musculus ( 118) 836 155.4 6.9e-36 >>gi|59798475|sp|Q9P2E8.2|MARH4_HUMAN RecName: Full=E3 u (410 aa) initn: 3001 init1: 3001 opt: 3001 Z-score: 2827.8 bits: 532.3 E(): 8.2e-149 Smith-Waterman score: 3001; 100.000% identity (100.000% similar) in 410 aa overlap (43-452:1-410) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ :::::::::::::::::::::::::::::: gi|597 MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ 10 20 30 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNTLPALGAGGWAGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNTLPALGAGGWAGW 40 50 60 70 80 90 140 150 160 170 180 190 KIAA13 RGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 RGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSL 100 110 120 130 140 150 200 210 220 230 240 250 KIAA13 GSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 GSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYY 160 170 180 190 200 210 260 270 280 290 300 310 KIAA13 KYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 KYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQD 220 230 240 250 260 270 320 330 340 350 360 370 KIAA13 LLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 LLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGG 280 290 300 310 320 330 380 390 400 410 420 430 KIAA13 RTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|597 RTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRP 340 350 360 370 380 390 440 450 KIAA13 HEQRSPPGSSRELVMRVTTV :::::::::::::::::::: gi|597 HEQRSPPGSSRELVMRVTTV 400 410 >>gi|114583204|ref|XP_526023.2| PREDICTED: membrane-asso (411 aa) initn: 2404 init1: 2404 opt: 2989 Z-score: 2816.5 bits: 530.2 E(): 3.5e-148 Smith-Waterman score: 2989; 99.757% identity (99.757% similar) in 411 aa overlap (43-452:1-411) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ :::::::::::::::::::::::::::::: gi|114 MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ 10 20 30 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|114 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNNTLPALGAGGWAG 40 50 60 70 80 90 140 150 160 170 180 190 KIAA13 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS 100 110 120 130 140 150 200 210 220 230 240 250 KIAA13 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 160 170 180 190 200 210 260 270 280 290 300 310 KIAA13 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ 220 230 240 250 260 270 320 330 340 350 360 370 KIAA13 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG 280 290 300 310 320 330 380 390 400 410 420 430 KIAA13 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR 340 350 360 370 380 390 440 450 KIAA13 PHEQRSPPGSSRELVMRVTTV ::::::::::::::::::::: gi|114 PHEQRSPPGSSRELVMRVTTV 400 410 >>gi|74005706|ref|XP_545636.2| PREDICTED: similar to mem (523 aa) initn: 2264 init1: 2223 opt: 2847 Z-score: 2681.8 bits: 505.7 E(): 1.1e-140 Smith-Waterman score: 2847; 87.555% identity (92.576% similar) in 458 aa overlap (2-452:66-523) 10 20 KIAA13 EKPVRKQTPP-TTQIHCGPPKPVL-SPSFKT .::::: :: .: . : : .: : : :: gi|740 PPPQQHRRPRADSEQQEEGDHGPGAEEKAREPVRKQIPPHNTALLWTPLKTILLSSSEKT 40 50 60 70 80 90 30 40 50 60 70 80 KIAA13 PATPLGLSTSTGHMLMPLCGLLWWWW----CCCSGWYCYGLCAPAPQMLRHQGLLKCRCR ::.: :::.::::::::: ::::::: ::: .:: ::::::::::::::::::::: gi|740 PAAPPGLSASTGHMLMPLSGLLWWWWWCCCCCCCAWYRCGLCAPAPQMLRHQGLLKCRCR 100 110 120 130 140 150 90 100 110 120 130 140 KIAA13 MLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAGWRGPREVVGREPP ::::::::::::::: ::::::::::::.::::: :::::::::::::::::: :::: gi|740 MLFNDLKVFLLRRPPPAPLPMHGDPQPPSLAANNNTLPALGAGGWAGWRGPREGVGRETT 160 170 180 190 200 210 150 160 170 180 190 200 KIAA13 PVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTPL :.:: ::::::::::::::::::::.::::::::::::: :.:: ::::::::::::::: gi|740 PLPPAPPLPPSSVEDDWGGPATEPPTSLLSSASSDDFCKGKAEDCYSLGSSLDSGMRTPL 220 230 240 250 260 270 210 220 230 240 250 260 KIAA13 CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNP 280 290 300 310 320 330 270 280 290 300 310 320 KIAA13 LQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMYGF :::::::::::::::.::::::::::::::::::::::::::.::::::::::::::::: gi|740 LQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQDLLFQICYGMYGF 340 350 360 370 380 390 330 340 350 360 370 380 KIAA13 MDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTNPRTSSSTQA :::::::::.:::::::::::::::::::::::::::::::::::.:::::::::::::: gi|740 MDVVCIGLIVHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSGGRTNPRTSSSTQA 400 410 420 430 440 450 390 400 410 420 430 440 KIAA13 NIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRE : :.: ::..:::. :.:::.::.:: :::: :::::::::::::::::::::: :.::: gi|740 NAPASGEEAVGTPGAEEGPARAASHPPGPLSDHHCAYTILHILSHLRPHEQRSPQGGSRE 460 470 480 490 500 510 450 KIAA13 LVMRVTTV :::::::: gi|740 LVMRVTTV 520 >>gi|149710122|ref|XP_001490009.1| PREDICTED: membrane-a (411 aa) initn: 2480 init1: 2480 opt: 2765 Z-score: 2606.1 bits: 491.3 E(): 1.9e-136 Smith-Waterman score: 2765; 92.718% identity (96.359% similar) in 412 aa overlap (43-452:1-411) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCS-GWYCYGLCAPAP ::::: :::::::::: .:: ::::::: gi|149 MLMPLSGLLWWWWCCCCCAWYPCGLCAPAP 10 20 30 80 90 100 110 120 130 KIAA13 QMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWA ::::::::::::::::::::::::::::: :::::::::::::::::: ::::::::::: gi|149 QMLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQPPGLAANNNTLPALGAGGWA 40 50 60 70 80 90 140 150 160 170 180 190 KIAA13 GWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRY ::::::: :::: ::.::::::::: ::::::: ::::::::.:::::::::: :.:::: gi|149 GWRGPREGVGRETPPLPPPPPLPPS-VEDDWGGTATEPPASLFSSASSDDFCKGKAEDRY 100 110 120 130 140 200 210 220 230 240 250 KIAA13 SLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC 150 160 170 180 190 200 260 270 280 290 300 310 KIAA13 YYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQR :::::::::::::::::::::::::::::.::::::::::::::::::::::::::.::: gi|149 YYKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQR 210 220 230 240 250 260 320 330 340 350 360 370 KIAA13 QDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|149 QDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKS 270 280 290 300 310 320 380 390 400 410 420 430 KIAA13 GGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHL ::::::::::::::: :.::::..::::::.:::.::.::::::: :::::::::::::: gi|149 GGRTNPRTSSSTQANAPASEEEATGTPAPEEGPARAASHPSGPLSDHHCAYTILHILSHL 330 340 350 360 370 380 440 450 KIAA13 RPHEQRSPPGSSRELVMRVTTV ::::::.: :.::::::::::: gi|149 RPHEQRTPQGGSRELVMRVTTV 390 400 410 >>gi|194664312|ref|XP_001789546.1| PREDICTED: similar to (409 aa) initn: 2461 init1: 2461 opt: 2751 Z-score: 2593.0 bits: 488.9 E(): 1e-135 Smith-Waterman score: 2751; 92.214% identity (96.594% similar) in 411 aa overlap (43-452:1-409) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ ::::: ::: ::::::. ::: :::.:::: gi|194 MLMPLSGLLRWWWCCCA-WYCCGLCTPAPQ 10 20 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG :::::::::::::::::::::::::::: :::::::.:::::::::: :::::::::::: gi|194 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGEPQPPGLAANNNTLPALGAGGWAG 30 40 50 60 70 80 140 150 160 170 180 190 KIAA13 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS :::::: :.:: ::.::::::::: :::::::::::::. :::::::::::: :.::::: gi|194 WRGPREGVSRETPPLPPPPPLPPS-VEDDWGGPATEPPVLLLSSASSDDFCKGKAEDRYS 90 100 110 120 130 140 200 210 220 230 240 250 KIAA13 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 150 160 170 180 190 200 260 270 280 290 300 310 KIAA13 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ ::::::::::::::::::::::::::::.::::::::::::::::::::::::::.:::: gi|194 YKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQ 210 220 230 240 250 260 320 330 340 350 360 370 KIAA13 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG ::::::::::::::::::::::::::::::::::::::::::::::::::.::::.::.: gi|194 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKAKDLEEQKTG 270 280 290 300 310 320 380 390 400 410 420 430 KIAA13 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR :::::::::::::: :.::::.:::::::.:::.:::::::::: ::::::::::::::: gi|194 GRTNPRTSSSTQANAPTSEEEAAGTPAPEEGPARAAGHPSGPLSDHHCAYTILHILSHLR 330 340 350 360 370 380 440 450 KIAA13 PHEQRSPPGSSRELVMRVTTV :::::.: :.::::::::::: gi|194 PHEQRTPQGGSRELVMRVTTV 390 400 >>gi|125987840|sp|Q80TE3.3|MARH4_MOUSE RecName: Full=E3 (409 aa) initn: 2399 init1: 2399 opt: 2662 Z-score: 2509.3 bits: 473.4 E(): 4.5e-131 Smith-Waterman score: 2662; 89.781% identity (95.620% similar) in 411 aa overlap (43-452:1-409) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ ::::: :::::: ::: ::: :::.:::: gi|125 MLMPLGGLLWWW-CCCCGWYSCGLCTPAPQ 10 20 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG :::::::::::::::::::::::::::: :::::::::: ::.:::: :::::::::::: gi|125 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG 30 40 50 60 70 80 140 150 160 170 180 190 KIAA13 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS ::::::.:::: ::.:::::::::. .::: :::: ::::::::::::.:::::::: :: gi|125 WRGPREAVGRETPPLPPPPPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKEKTEDCYS 90 100 110 120 130 140 200 210 220 230 240 250 KIAA13 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 150 160 170 180 190 200 260 270 280 290 300 310 KIAA13 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ ::::::::::::::::::::::::::::.::::::::::::::::::::::::::.:::: gi|125 YKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQ 210 220 230 240 250 260 320 330 340 350 360 370 KIAA13 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|125 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSG 270 280 290 300 310 320 380 390 400 410 420 430 KIAA13 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR :::: .::::.:::.::.:::.:. :: :.::..::.:::::.:.::::::::::::::: gi|125 GRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTILHILSHLR 330 340 350 360 370 380 440 450 KIAA13 PHEQRSPPGSSRELVMRVTTV ::.::: ::.:::::::::: gi|125 PHDQRSTQGSGRELVMRVTTV 390 400 >>gi|109486240|ref|XP_001074008.1| PREDICTED: similar to (409 aa) initn: 1708 init1: 1708 opt: 2648 Z-score: 2496.2 bits: 471.0 E(): 2.4e-130 Smith-Waterman score: 2648; 89.781% identity (94.891% similar) in 411 aa overlap (43-452:1-409) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ ::::: ::::: ::: :::: :::.:::: gi|109 MLMPLGGLLWWCCCCCCGWYCCGLCTPAPQ 10 20 30 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG :::::::::::::::::::::::::::: :::::::::: ::.:::: :::::::::::: gi|109 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG 40 50 60 70 80 90 140 150 160 170 180 190 KIAA13 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS ::::::.:::: ::.::::::::: ::::: ::: ::::::::::::.:::::::: :: gi|109 WRGPREAVGRETPPLPPPPPLPPS-VEDDWDGPAIGPPASLLSSASSDEFCKEKTEDCYS 100 110 120 130 140 200 210 220 230 240 250 KIAA13 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LGS-LDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 150 160 170 180 190 200 260 270 280 290 300 310 KIAA13 YKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQ ::::::::::::::::::::::::::::.::::::::::::::::::::::::::.:::: gi|109 YKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQRQ 210 220 230 240 250 260 320 330 340 350 360 370 KIAA13 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 DLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKSG 270 280 290 300 310 320 380 390 400 410 420 430 KIAA13 GRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLR :::: .::::.::..::.:::.:. :: :.:: .::.:::::.:.::::::::::::::: gi|109 GRTNLQTSSSAQASMPSTEEEAASPPAREEGPPRAASHPSGPVSQHHCAYTILHILSHLR 330 340 350 360 370 380 440 450 KIAA13 PHEQRSPPGSSRELVMRVTTV ::.::: ::::::::::::: gi|109 PHDQRSTQGSSRELVMRVTTV 390 400 >>gi|29179408|gb|AAH48793.1| MARCH4 protein [Homo sapien (357 aa) initn: 2553 init1: 2553 opt: 2553 Z-score: 2407.7 bits: 454.4 E(): 2.1e-125 Smith-Waterman score: 2553; 100.000% identity (100.000% similar) in 357 aa overlap (96-452:1-357) 70 80 90 100 110 120 KIAA13 LCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNTLPALG :::::::::::::::::::::::::::::: gi|291 LRRPPQAPLPMHGDPQPPGLAANNTLPALG 10 20 30 130 140 150 160 170 180 KIAA13 AGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 AGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEK 40 50 60 70 80 90 190 200 210 220 230 240 KIAA13 TEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 TEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCW 100 110 120 130 140 150 250 260 270 280 290 300 KIAA13 SCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 SCELCYYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPS 160 170 180 190 200 210 310 320 330 340 350 360 KIAA13 ARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 ARWQRQDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDL 220 230 240 250 260 270 370 380 390 400 410 420 KIAA13 EDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|291 EDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILH 280 290 300 310 320 330 430 440 450 KIAA13 ILSHLRPHEQRSPPGSSRELVMRVTTV ::::::::::::::::::::::::::: gi|291 ILSHLRPHEQRSPPGSSRELVMRVTTV 340 350 >>gi|126337860|ref|XP_001363894.1| PREDICTED: similar to (419 aa) initn: 1297 init1: 1297 opt: 2535 Z-score: 2389.9 bits: 451.3 E(): 2e-124 Smith-Waterman score: 2535; 83.532% identity (91.647% similar) in 419 aa overlap (43-452:1-419) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ ::::: :.:::::::: ::: : : ::: gi|126 MLMPLSGFLWWWWCCCCCWYCCGGCYQAPQ 10 20 30 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG :.:::::::::::::::::::::::::: :::::::::::::::::: ::::::::::.: gi|126 MFRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQPPGLAANNNTLPALGAGGWVG 40 50 60 70 80 90 140 150 160 170 180 190 KIAA13 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS :::::: .: : ::.::::::::::.:::::: ...::::::::.::::::: :.:: : gi|126 WRGPREGTGGEIPPLPPPPPLPPSSAEDDWGGQVVDPPASLLSSTSSDDFCKGKAEDPGS 100 110 120 130 140 150 200 210 220 230 240 250 KIAA13 LGSSLDSGMRTPLCRICFQGPE-QGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC :::: ..:. .::: ::..:. .:::::::::::::::::::::::::::::::::::: gi|126 LGSSQQAGLDSPLCLTCFRAPRREGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC 160 170 180 190 200 210 260 270 280 290 300 310 KIAA13 YYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQR :::::::::::::::::::::::::::::.::::::::::::::::::::::::::.::: gi|126 YYKYHVIAISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASISWLIWSTFSPSAKWQR 220 230 240 250 260 270 320 330 340 350 360 370 KIAA13 QDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKA ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|126 QDLLFQICYGMYGFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDIEDQKA 280 290 300 310 320 330 380 390 400 410 420 KIAA13 GGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAG-------HPSGPLSHHHCAYTI ::::::::::::::. :::::..:.:: .: ....: ::::::. ::::::: gi|126 GGRTNPRTSSSTQADAASSEEEAVGNPAQGDGGGSGGGGGNRAPSHPSGPLADHHCAYTI 340 350 360 370 380 390 430 440 450 KIAA13 LHILSHLRPHEQRSPPGSSRELVMRVTTV ::::::::::::::: :..:::::::::: gi|126 LHILSHLRPHEQRSPTGGNRELVMRVTTV 400 410 >>gi|149234074|ref|XP_001477280.1| PREDICTED: similar to (412 aa) initn: 1669 init1: 903 opt: 2110 Z-score: 1990.7 bits: 377.4 E(): 3.5e-102 Smith-Waterman score: 2110; 70.813% identity (84.689% similar) in 418 aa overlap (43-452:1-412) 20 30 40 50 60 70 KIAA13 QIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCYGLCAPAPQ ::::: :::::: ::: ::: :::.:::: gi|149 MLMPLGGLLWWW-CCCCGWYSCGLCTPAPQ 10 20 80 90 100 110 120 130 KIAA13 MLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANN-TLPALGAGGWAG :::::::::::::::::::::::::::: :::::::::: ::.:::: :::::::::::: gi|149 MLRHQGLLKCRCRMLFNDLKVFLLRRPPPAPLPMHGDPQLPGVAANNNTLPALGAGGWAG 30 40 50 60 70 80 140 150 160 170 180 190 KIAA13 WRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYS ::::::.:::: ::.:::::::::. .::: :::: ::::::::::::.:::::::: :: gi|149 WRGPREAVGRETPPLPPPPPLPPSG-DDDWDGPATGPPASLLSSASSDEFCKEKTEDCYS 90 100 110 120 130 140 200 210 220 230 240 250 KIAA13 LGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTH-QPCLIKWISERGCWSCELC ::::::::::::::::::::::: . : : :..:: ::..::. ::.: .:: gi|149 LGSSLDSGMRTPLCRICFQGPEQVTVAVFCYCLLSLRCTTVLPCFVKWVCPFGCFSLKLC 150 160 170 180 190 200 260 270 280 290 300 310 KIAA13 YYKYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQR :.: . ...::..:. .....:.::... : : : . . :: : ..: : :.: gi|149 YMKQQK---TSENPVSWKILNFNLIKKVKISQIISGEPFALPLLLWL-WPSLSASKSWSR 210 220 230 240 250 260 320 330 340 350 360 KIAA13 QDLLFQICYG-MYGFMDVVCI-----GLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKD : ::. : : ::.:...:. :::::::::::::::::::::::::::::::::: gi|149 LDELFSKCQGSTYGIMNILCLLLFLAGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKD 270 280 290 300 310 320 370 380 390 400 410 420 KIAA13 LEDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTIL :::::.::::: .::::.:::.::.:::.:. :: :.::..::.:::::.:.:::::::: gi|149 LEDQKSGGRTNLQTSSSAQANLPSAEEEAASPPAREEGPTRAASHPSGPVSQHHCAYTIL 330 340 350 360 370 380 430 440 450 KIAA13 HILSHLRPHEQRSPPGSSRELVMRVTTV :::::::::.::: ::.:::::::::: gi|149 HILSHLRPHDQRSTQGSGRELVMRVTTV 390 400 410 452 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 15:42:58 2009 done: Wed Mar 4 15:47:15 2009 Total Scan time: 1480.670 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]