# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj06168.fasta.nr -Q ../query/KIAA1385.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1385, 768 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823655 sequences Expectation_n fit: rho(ln(x))= 6.0783+/-0.000191; mu= 9.7030+/- 0.011 mean_var=96.1391+/-18.465, 0's: 45 Z-trim: 67 B-trim: 0 in 0/65 Lambda= 0.130805 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|13431554|sp|Q9NQX3.1|GEPH_HUMAN RecName: Full=G ( 736) 4851 926.0 0 gi|88687222|emb|CAA47009.2| Gephyrin [Rattus norve ( 736) 4848 925.4 0 gi|16605466|emb|CAC81240.1| gephyrin [Homo sapiens ( 736) 4846 925.0 0 gi|149051519|gb|EDM03692.1| rCG61772, isoform CRA_ ( 736) 4842 924.3 0 gi|82175210|sp|Q9PW38.1|GEPH_CHICK RecName: Full=G ( 736) 4771 910.9 0 gi|189502802|gb|ACE06970.1| gephyrin isoform [Ratt ( 730) 4708 899.0 0 gi|221041812|dbj|BAH12583.1| unnamed protein produ ( 705) 4201 803.3 0 gi|126282619|ref|XP_001369816.1| PREDICTED: simila ( 772) 3273 628.2 3.6e-177 gi|148670669|gb|EDL02616.1| gephyrin [Mus musculus ( 751) 3271 627.8 4.6e-177 gi|149051518|gb|EDM03691.1| rCG61772, isoform CRA_ ( 772) 3271 627.8 4.7e-177 gi|117558669|gb|AAI27059.1| Gphn protein [Mus musc ( 772) 3271 627.8 4.7e-177 gi|114653540|ref|XP_001135451.1| PREDICTED: gephyr ( 785) 3261 625.9 1.8e-176 gi|114653550|ref|XP_001135542.1| PREDICTED: gephyr ( 645) 3259 625.5 2e-176 gi|114653552|ref|XP_001135140.1| PREDICTED: gephyr ( 659) 3259 625.5 2e-176 gi|119601329|gb|EAW80923.1| gephyrin, isoform CRA_ ( 763) 3259 625.6 2.2e-176 gi|109083983|ref|XP_001105293.1| PREDICTED: gephyr ( 769) 3259 625.6 2.2e-176 gi|10636475|emb|CAC10537.1| gephyrin [Homo sapiens ( 769) 3259 625.6 2.2e-176 gi|221040818|dbj|BAH12110.1| unnamed protein produ ( 659) 3251 624.0 5.7e-176 gi|189054960|dbj|BAG37944.1| unnamed protein produ ( 769) 3250 623.9 7.3e-176 gi|114653556|ref|XP_510012.2| PREDICTED: similar t ( 645) 2996 575.9 1.7e-161 gi|73964217|ref|XP_547861.2| PREDICTED: similar to ( 742) 2996 575.9 1.9e-161 gi|114653546|ref|XP_001135627.1| PREDICTED: simila ( 755) 2996 575.9 1.9e-161 gi|97536232|sp|Q03555.3|GEPH_RAT RecName: Full=Gep ( 768) 2996 575.9 2e-161 gi|114653542|ref|XP_001135362.1| PREDICTED: simila ( 768) 2996 575.9 2e-161 gi|49899139|gb|AAH76865.1| Gphn protein [Xenopus l ( 857) 2990 574.8 4.7e-161 gi|126282621|ref|XP_001369844.1| PREDICTED: simila ( 769) 2977 572.3 2.4e-160 gi|221040076|dbj|BAH11801.1| unnamed protein produ ( 782) 2977 572.4 2.4e-160 gi|81875323|sp|Q8BUV3.1|GEPH_MOUSE RecName: Full=G ( 769) 2976 572.2 2.7e-160 gi|49257222|gb|AAH71153.1| MGC83148 protein [Xenop ( 860) 2971 571.2 5.6e-160 gi|169145899|emb|CAQ14479.1| novel protein similar ( 448) 2904 558.4 2.1e-156 gi|51247530|pdb|1T3E|A Chain A, Structural Basis O ( 421) 2804 539.5 9.8e-151 gi|93279738|pdb|2FTS|A Chain A, Crystal Structure ( 419) 2787 536.3 9e-150 gi|189533529|ref|XP_001346128.2| PREDICTED: simila ( 455) 2769 532.9 1e-148 gi|114653548|ref|XP_001135288.1| PREDICTED: gephyr ( 709) 2735 526.7 1.2e-146 gi|194225110|ref|XP_001494492.2| PREDICTED: gephyr ( 770) 2374 458.6 4.2e-126 gi|194038431|ref|XP_001925486.1| PREDICTED: gephyr ( 361) 2359 455.5 1.7e-125 gi|47220100|emb|CAF99013.1| unnamed protein produc ( 918) 2313 447.1 1.4e-122 gi|189530908|ref|XP_001921795.1| PREDICTED: simila ( 797) 2210 427.6 9e-117 gi|210129515|gb|EEA77189.1| hypothetical protein B ( 430) 1897 368.4 3.3e-99 gi|210129510|gb|EEA77184.1| hypothetical protein B ( 430) 1897 368.4 3.3e-99 gi|55729824|emb|CAH91640.1| hypothetical protein [ ( 468) 1875 364.2 6.3e-98 gi|134026188|gb|AAI35911.1| LOC100124966 protein [ ( 495) 1863 362.0 3.2e-97 gi|156214688|gb|EDO35668.1| predicted protein [Nem ( 624) 1615 315.3 4.7e-83 gi|119601331|gb|EAW80925.1| gephyrin, isoform CRA_ ( 398) 1604 313.1 1.4e-82 gi|190580217|gb|EDV20302.1| hypothetical protein T ( 644) 1571 307.0 1.5e-80 gi|198426706|ref|XP_002130264.1| PREDICTED: simila ( 735) 1524 298.1 7.9e-78 gi|47224562|emb|CAG03546.1| unnamed protein produc ( 877) 1502 294.0 1.6e-76 gi|115681543|ref|XP_001201596.1| PREDICTED: hypoth ( 435) 1449 283.8 9.5e-74 gi|194038433|ref|XP_001925530.1| PREDICTED: simila ( 199) 1254 246.8 6.1e-63 gi|193082956|ref|NP_001122752.1| molybdenum cofact ( 629) 1242 244.9 7.3e-62 >>gi|13431554|sp|Q9NQX3.1|GEPH_HUMAN RecName: Full=Gephy (736 aa) initn: 4851 init1: 4851 opt: 4851 Z-score: 4946.6 bits: 926.0 E(): 0 Smith-Waterman score: 4851; 100.000% identity (100.000% similar) in 736 aa overlap (33-768:1-736) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|134 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ 640 650 660 670 680 690 730 740 750 760 KIAA13 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::::::::::::::::::::::::::: gi|134 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL 700 710 720 730 >>gi|88687222|emb|CAA47009.2| Gephyrin [Rattus norvegicu (736 aa) initn: 4848 init1: 4848 opt: 4848 Z-score: 4943.6 bits: 925.4 E(): 0 Smith-Waterman score: 4848; 99.864% identity (100.000% similar) in 736 aa overlap (33-768:1-736) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|886 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|886 QCEEEEEEKKDSGVASTEDSSSSHITAAALAAKIPDSIISRGVQVLPRDTASLSTTPSES 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ 640 650 660 670 680 690 730 740 750 760 KIAA13 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::::::::::::::::::::::::::: gi|886 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL 700 710 720 730 >>gi|16605466|emb|CAC81240.1| gephyrin [Homo sapiens] (736 aa) initn: 4846 init1: 4846 opt: 4846 Z-score: 4941.5 bits: 925.0 E(): 0 Smith-Waterman score: 4846; 99.864% identity (100.000% similar) in 736 aa overlap (33-768:1-736) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|166 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|166 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTVSLSTTPSES 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ 640 650 660 670 680 690 730 740 750 760 KIAA13 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::::::::::::::::::::::::::: gi|166 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL 700 710 720 730 >>gi|149051519|gb|EDM03692.1| rCG61772, isoform CRA_b [R (736 aa) initn: 4842 init1: 4842 opt: 4842 Z-score: 4937.5 bits: 924.3 E(): 0 Smith-Waterman score: 4842; 99.728% identity (99.864% similar) in 736 aa overlap (33-768:1-736) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|149 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|149 APRDVTPEATKEVIEREAPGMPLAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|149 QCEEEEEEKKDSGVASTEDSSSSHITAAALAAKIPDSIISRGVQVLPRDTASLSTTPSES 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ 640 650 660 670 680 690 730 740 750 760 KIAA13 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::::::::::::::::::::::::::: gi|149 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL 700 710 720 730 >>gi|82175210|sp|Q9PW38.1|GEPH_CHICK RecName: Full=Gephy (736 aa) initn: 4771 init1: 4771 opt: 4771 Z-score: 4865.0 bits: 910.9 E(): 0 Smith-Waterman score: 4771; 98.505% identity (99.049% similar) in 736 aa overlap (33-768:1-736) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL ::.::::::::::::::::::::::::::: gi|821 MASEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|821 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL :::::::::::::::::::::::::: ::::.:::::::::::::::::::::::::::: gi|821 ARPGQDIRPIGHDIKRGECVLAKGTHTGPSEVGLLATVGVTEVEVNKFPVVAVMSTGNEL 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT ::::::.:::::::::::::::::: :::::::::::::::::::::::: ::::::::: gi|821 LNPEDDVLPGKIRDSNRSTLLATIQAHGYPTINLGIVGDNPDDLLNALNERISRADVIIT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS ::::::: : ::::::::::::::::::::::::::::::::::::::::::::::. :: gi|821 SGGVSMGGKYYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGQSVS 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|821 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPHPWAQ 640 650 660 670 680 690 730 740 750 760 KIAA13 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::::::::::::::::::::::::::: gi|821 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL 700 710 720 730 >>gi|189502802|gb|ACE06970.1| gephyrin isoform [Rattus n (730 aa) initn: 4708 init1: 4708 opt: 4708 Z-score: 4800.8 bits: 899.0 E(): 0 Smith-Waterman score: 4708; 99.442% identity (99.861% similar) in 717 aa overlap (52-768:14-730) 30 40 50 60 70 80 KIAA13 APVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLL . :::::::::::::::::::::::::::: gi|189 MSFPLSPAFTLFHILVSDSCFRNLAEDRSGINLKDLVQDPSLL 10 20 30 40 90 100 110 120 130 140 KIAA13 GGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAP :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GGTISAYKIVPNEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAP 50 60 70 80 90 100 150 160 170 180 190 200 KIAA13 GMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLL 110 120 130 140 150 160 210 220 230 240 250 260 KIAA13 RDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTED 170 180 190 200 210 220 270 280 290 300 310 320 KIAA13 SSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKV ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SSSSHITAAALAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA13 QSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRD 290 300 310 320 330 340 390 400 410 420 430 440 KIAA13 GMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVM 350 360 370 380 390 400 450 460 470 480 490 500 KIAA13 RVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGEC 410 420 430 440 450 460 510 520 530 540 550 560 KIAA13 VLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRST 470 480 490 500 510 520 570 580 590 600 610 620 KIAA13 LLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDID 530 540 550 560 570 580 630 640 650 660 670 680 KIAA13 LHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGI 590 600 610 620 630 640 690 700 710 720 730 740 KIAA13 LDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGL 650 660 670 680 690 700 750 760 KIAA13 LMLPPKTEQYVELHKGEVVDVMVIGRL ::::::::::::::::::::::::::: gi|189 LMLPPKTEQYVELHKGEVVDVMVIGRL 710 720 730 >>gi|221041812|dbj|BAH12583.1| unnamed protein product [ (705 aa) initn: 4198 init1: 4198 opt: 4201 Z-score: 4284.0 bits: 803.3 E(): 0 Smith-Waterman score: 4555; 95.516% identity (95.788% similar) in 736 aa overlap (33-768:1-705) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|221 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF ::::::::::::::::::::::::::::::::::::: gi|221 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIK----------------------- 40 50 60 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 --------ATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 70 80 90 100 110 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 120 130 140 150 160 170 250 260 270 280 290 300 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSES 180 190 200 210 220 230 310 320 330 340 350 360 KIAA13 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 PRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAF 240 250 260 270 280 290 370 380 390 400 410 420 KIAA13 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 ITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFII 300 310 320 330 340 350 430 440 450 460 470 480 KIAA13 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 GESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQ 360 370 380 390 400 410 490 500 510 520 530 540 KIAA13 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 ARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNEL 420 430 440 450 460 470 550 560 570 580 590 600 KIAA13 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 LNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT 480 490 500 510 520 530 610 620 630 640 650 660 KIAA13 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 SGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVS 540 550 560 570 580 590 670 680 690 700 710 720 KIAA13 AVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 AVATCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQ 600 610 620 630 640 650 730 740 750 760 KIAA13 STGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL ::::.::::::::::::::::::::::::::::::::::::::::: gi|221 STGNRMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL 660 670 680 690 700 >>gi|126282619|ref|XP_001369816.1| PREDICTED: similar to (772 aa) initn: 3272 init1: 3272 opt: 3273 Z-score: 3337.0 bits: 628.2 E(): 3.6e-177 Smith-Waterman score: 4769; 95.337% identity (95.337% similar) in 772 aa overlap (33-768:1-772) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|126 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAK--------------------------- ::::::::::::::::::::::::::::::::: gi|126 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKKHPFYTSPAVIMAHGEQPIPGLISYSH 220 230 240 250 260 270 280 290 300 310 320 KIAA13 ---------IPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCS ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HATGSAGERIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCS 280 290 300 310 320 330 330 340 350 360 370 380 KIAA13 SKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRV 340 350 360 370 380 390 390 400 410 420 430 440 KIAA13 LAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTG 400 410 420 430 440 450 450 460 470 480 490 500 KIAA13 APIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 APIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKG 460 470 480 490 500 510 510 520 530 540 550 560 KIAA13 THMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 THMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATI 520 530 540 550 560 570 570 580 590 600 610 620 KIAA13 QEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQI 580 590 600 610 620 630 630 640 650 660 670 680 KIAA13 HFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRP 640 650 660 670 680 690 690 700 710 720 730 740 KIAA13 TIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 TIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPP 700 710 720 730 740 750 750 760 KIAA13 KTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::: gi|126 KTEQYVELHKGEVVDVMVIGRL 760 770 >>gi|148670669|gb|EDL02616.1| gephyrin [Mus musculus] (751 aa) initn: 3270 init1: 3270 opt: 3271 Z-score: 3335.1 bits: 627.8 E(): 4.6e-177 Smith-Waterman score: 4631; 95.073% identity (95.206% similar) in 751 aa overlap (54-768:1-751) 30 40 50 60 70 80 KIAA13 VSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGG :::::::::::::::::::::::::::::: gi|148 VSDSCFRNLAEDRSGINLKDLVQDPSLLGG 10 20 30 90 100 110 120 130 140 KIAA13 TISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGM 40 50 60 70 80 90 150 160 170 180 190 200 KIAA13 ALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRD 100 110 120 130 140 150 210 220 230 240 250 260 KIAA13 AIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSS 160 170 180 190 200 210 270 280 KIAA13 SSHITAAAIAAK------------------------------------IPDSIISRGVQV ::::::::.::: :::::::::::: gi|148 SSHITAAALAAKKHPFYTSPALFMANHGQPIPGLISYSHHATGSADKRIPDSIISRGVQV 220 230 240 250 260 270 290 300 310 320 330 340 KIAA13 LPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARR 280 290 300 310 320 330 350 360 370 380 390 400 KIAA13 HRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDG 340 350 360 370 380 390 410 420 430 440 450 460 KIAA13 YAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRE 400 410 420 430 440 450 470 480 490 500 510 520 KIAA13 SDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEV 460 470 480 490 500 510 530 540 550 560 570 580 KIAA13 NKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLL 520 530 540 550 560 570 590 600 610 620 630 640 KIAA13 NALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDID 580 590 600 610 620 630 650 660 670 680 690 700 KIAA13 GVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHR 640 650 660 670 680 690 710 720 730 740 750 760 KIAA13 CILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGR 700 710 720 730 740 750 KIAA13 L : gi|148 L >>gi|149051518|gb|EDM03691.1| rCG61772, isoform CRA_a [R (772 aa) initn: 3270 init1: 3270 opt: 3271 Z-score: 3334.9 bits: 627.8 E(): 4.7e-177 Smith-Waterman score: 4760; 95.078% identity (95.207% similar) in 772 aa overlap (33-768:1-772) 10 20 30 40 50 60 KIAA13 RSPRRARSRPARSGLRFLPAPVSAVTALGNMATEGMILTNHDHQIRVGVLTVSDSCFRNL :::::::::::::::::::::::::::::: gi|149 MATEGMILTNHDHQIRVGVLTVSDSCFRNL 10 20 30 70 80 90 100 110 120 KIAA13 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 APRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|149 APRDVTPEATKEVIEREAPGMPLAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGV 160 170 180 190 200 210 250 260 270 KIAA13 QCEEEEEEKKDSGVASTEDSSSSHITAAAIAAK--------------------------- :::::::::::::::::::::::::::::.::: gi|149 QCEEEEEEKKDSGVASTEDSSSSHITAAALAAKNHPFYTSPAVFMANHGQPIPGLISYSH 220 230 240 250 260 270 280 290 300 310 320 KIAA13 ---------IPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCS ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HATGSADKRIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCS 280 290 300 310 320 330 330 340 350 360 370 380 KIAA13 SKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRV 340 350 360 370 380 390 390 400 410 420 430 440 KIAA13 LAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTG 400 410 420 430 440 450 450 460 470 480 490 500 KIAA13 APIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 APIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKG 460 470 480 490 500 510 510 520 530 540 550 560 KIAA13 THMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATI 520 530 540 550 560 570 570 580 590 600 610 620 KIAA13 QEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQI 580 590 600 610 620 630 630 640 650 660 670 680 KIAA13 HFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRP 640 650 660 670 680 690 690 700 710 720 730 740 KIAA13 TIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPP 700 710 720 730 740 750 750 760 KIAA13 KTEQYVELHKGEVVDVMVIGRL :::::::::::::::::::::: gi|149 KTEQYVELHKGEVVDVMVIGRL 760 770 768 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 14:46:31 2009 done: Wed Mar 4 14:50:09 2009 Total Scan time: 1581.060 Total Display time: 0.440 Function used was FASTA [version 34.26.5 April 26, 2007]