hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01124375/chunk_1/iprscan-20080502-01124375.nocrc
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Query sequence: KIAA1380
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02373.13.fs JmjC domain                                     45.2    6.5e-13   1
PF02373.13.ls JmjC domain                                     26.3    2.9e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02373.13.ls   1/1    1107  1206 ..     1   126 []    26.3  2.9e-06
PF02373.13.fs   1/1    1129  1206 ..    46   126 .]    45.2  6.5e-13

Alignments of top-scoring domains:
PF02373.13.ls: domain 1 of 1, from 1107 to 1206: score 26.3, E = 2.9e-06
                   *->wlYvGmpfSttpwHiEdqglySinylhfgapkvWYgiPseyaekfek
                                     ++     + ++++ +++v ++ +   + + e 
    KIAA1380  1107    ---------------DSSEIPGALWHIYAGKDVDKIREFLQKISKE- 1137 

                   lakvlskhfsaPdlnggeqpdldlrhlvtlisPkvleLrengipvyrfvQ
                     + l+          +++p+ d+ ++v+   + +l L+e g++ ++ +Q
    KIAA1380  1138 --QGLEVL-------PEHDPIRDQSWYVNKKLRQRL-LEEYGVRTCTLIQ 1177 

                   kpGEfVitfPgayHavfNlGfniaeavNF<-*
                   + G++++ ++ga H+v+N  ++i ++ +F   
    KIAA1380  1178 FLGDAIVLPAGALHQVQNFHSCIQVTEDF    1206 

PF02373.13.fs: domain 1 of 1, from 1129 to 1206: score 45.2, E = 6.5e-13
                   *->eklakvlskhfsaPdlnggeqpdldlrhlvtlisPkvleLrengipv
                      e+l+k+ ++++ ++ l  +++p+ d+ ++v+   + +l L+e g++ 
    KIAA1380  1129    EFLQKISKEQG-LEVL-PEHDPIRDQSWYVNKKLRQRL-LEEYGVRT 1172 

                   yrfvQkpGEfVitfPgayHavfNlGfniaeavNF<-*
                   ++ +Q+ G++++ ++ga H+v+N  ++i ++ +F   
    KIAA1380  1173 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDF    1206 

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