hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01043209/chunk_1/iprscan-20080502-01043209.nocrc
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Query sequence: KIAA1375
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03097.8.fs BRO1-like domain                                72.5    4.4e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03097.8.fs   1/1       1    60 [.   378   446 .]    72.5  4.4e-22

Alignments of top-scoring domains:
PF03097.8.fs: domain 1 of 1, from 1 to 60: score 72.5, E = 4.4e-22
                   *->VPsessLppikpasmVKpippeevlkpqdeletdkpevgdLFkkLVP
                      VP++++L+pi++a++VK++p++++ ++ +          dLF k+VP
    KIAA1375     1    VPDLKDLDPIGKATLVKSTPVNVPISQKFT---------DLFEKMVP 38   

                   laVhealsaYsErkdklvraev<-*
                   ++V ++l+aY++rk++lv++++   
    KIAA1375    39 VSVQQSLAAYNQRKADLVNRSI    60   

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