# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj03335.fasta.nr -Q ../query/KIAA1372.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1372, 773 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7813427 sequences Expectation_n fit: rho(ln(x))= 5.5662+/-0.000197; mu= 12.3046+/- 0.011 mean_var=106.4319+/-20.053, 0's: 31 Z-trim: 86 B-trim: 41 in 1/64 Lambda= 0.124319 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|148746183|ref|NP_065849.1| ubiquitin specific p (1018) 5061 919.0 0 gi|46577708|sp|Q9P2H5.2|UBP35_HUMAN RecName: Full= (1017) 5055 917.9 0 gi|168278867|dbj|BAG11313.1| ubiquitin carboxyl-te ( 749) 5045 916.0 0 gi|119595462|gb|EAW75056.1| hCG27473 [Homo sapiens ( 749) 5039 914.9 0 gi|149257589|ref|XP_891616.2| PREDICTED: ubiquitin (1009) 4199 764.4 0 gi|193786370|dbj|BAG51653.1| unnamed protein produ ( 586) 3921 714.3 3.3e-203 gi|124297049|gb|AAI31490.1| USP35 protein [Homo sa ( 604) 3755 684.5 3.1e-194 gi|119918846|ref|XP_604057.3| PREDICTED: similar t ( 677) 3706 675.8 1.5e-191 gi|126327730|ref|XP_001362965.1| PREDICTED: simila (1036) 3077 563.2 1.8e-157 gi|194375095|dbj|BAG62660.1| unnamed protein produ ( 450) 3010 550.8 4.3e-154 gi|73988105|ref|XP_542286.2| PREDICTED: similar to (1072) 2744 503.5 1.8e-139 gi|109459079|ref|XP_238899.4| PREDICTED: similar t (1007) 2549 468.5 5.8e-129 gi|148668864|gb|EDL01032.1| mCG129167 [Mus musculu ( 587) 2389 439.5 1.7e-120 gi|118085252|ref|XP_417222.2| PREDICTED: similar t ( 997) 1922 356.0 4.1e-95 gi|114596191|ref|XP_001142743.1| PREDICTED: hypoth (1016) 1347 252.9 4.6e-64 gi|194679551|ref|XP_001252407.2| PREDICTED: simila ( 464) 1294 243.0 1.9e-61 gi|148668865|gb|EDL01033.1| mCG129727 [Mus musculu ( 247) 1272 238.8 1.9e-60 gi|210104335|gb|EEA52359.1| hypothetical protein B ( 972) 1230 231.9 9.2e-58 gi|189514882|ref|XP_001919108.1| PREDICTED: simila (1014) 1193 225.3 9.5e-56 gi|149635662|ref|XP_001513216.1| PREDICTED: hypoth ( 898) 1180 222.9 4.4e-55 gi|151553558|gb|AAI48041.1| USP38 protein [Bos tau (1040) 1162 219.7 4.5e-54 gi|51703474|gb|AAH81036.1| MGC81730 protein [Xenop (1037) 1159 219.2 6.6e-54 gi|149698194|ref|XP_001502179.1| PREDICTED: ubiqui (1041) 1158 219.0 7.5e-54 gi|73983888|ref|XP_855729.1| PREDICTED: similar to ( 734) 1154 218.1 9.6e-54 gi|109075769|ref|XP_001092467.1| PREDICTED: simila ( 978) 1154 218.3 1.2e-53 gi|73983884|ref|XP_855663.1| PREDICTED: similar to ( 980) 1154 218.3 1.2e-53 gi|73983886|ref|XP_855693.1| PREDICTED: similar to (1005) 1154 218.3 1.2e-53 gi|73983882|ref|XP_533279.2| PREDICTED: similar to (1037) 1154 218.3 1.2e-53 gi|109075765|ref|XP_001092815.1| PREDICTED: simila (1041) 1154 218.3 1.2e-53 gi|114596193|ref|XP_001142656.1| PREDICTED: hypoth ( 979) 1152 217.9 1.5e-53 gi|73909113|gb|AAH39115.1| USP38 protein [Homo sap (1004) 1152 217.9 1.5e-53 gi|114596195|ref|XP_001142522.1| PREDICTED: ubiqui (1004) 1152 217.9 1.5e-53 gi|38372866|sp|Q8NB14.2|UBP38_HUMAN RecName: Full= (1042) 1152 217.9 1.6e-53 gi|114596187|ref|XP_517457.2| PREDICTED: hypotheti (1042) 1152 217.9 1.6e-53 gi|47217343|emb|CAG11048.1| unnamed protein produc ( 735) 1148 217.1 2e-53 gi|126331343|ref|XP_001367345.1| PREDICTED: hypoth (1045) 1149 217.4 2.3e-53 gi|74197938|dbj|BAC33659.2| unnamed protein produc ( 776) 1145 216.5 3.1e-53 gi|26344009|dbj|BAC35661.1| unnamed protein produc (1042) 1145 216.7 3.8e-53 gi|38503388|sp|Q8BW70.2|UBP38_MOUSE RecName: Full= (1042) 1145 216.7 3.8e-53 gi|26342456|dbj|BAC34890.1| unnamed protein produc (1042) 1140 215.8 7e-53 gi|118089854|ref|XP_420421.2| PREDICTED: hypotheti (1035) 1132 214.3 1.9e-52 gi|156219890|gb|EDO40765.1| predicted protein [Nem ( 981) 1101 208.8 8.6e-51 gi|148678939|gb|EDL10886.1| mCG119517 [Mus musculu ( 523) 1026 195.0 6.2e-47 gi|115752506|ref|XP_001178896.1| PREDICTED: hypoth (1119) 986 188.2 1.5e-44 gi|149037936|gb|EDL92296.1| ubiquitin specific pro ( 501) 944 180.3 1.6e-42 gi|16553987|dbj|BAB71627.1| unnamed protein produc ( 706) 854 164.3 1.5e-37 gi|210102534|gb|EEA50582.1| hypothetical protein B ( 797) 822 158.6 8.6e-36 gi|215498493|gb|EEC07987.1| ubiquitin specific pro ( 844) 790 152.9 4.8e-34 gi|198415949|ref|XP_002124170.1| PREDICTED: simila ( 934) 789 152.8 5.8e-34 gi|149068946|gb|EDM18498.1| similar to Ubiquitin c ( 102) 500 100.0 5e-19 >>gi|148746183|ref|NP_065849.1| ubiquitin specific prote (1018 aa) initn: 5061 init1: 5061 opt: 5061 Z-score: 4906.4 bits: 919.0 E(): 0 Smith-Waterman score: 5061; 99.470% identity (99.868% similar) in 755 aa overlap (19-773:264-1018) 10 20 30 40 KIAA13 PLGCPHPSILGVPCPCVTVTPLTRMIDWVSWPLGKNIDKWIIALLKGL .: ..::::::::::::::::::::::::: gi|148 ASVVQHLPLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGL 240 250 260 270 280 290 50 60 70 80 90 100 KIAA13 AAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPP 300 310 320 330 340 350 110 120 130 140 150 160 KIAA13 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLL 360 370 380 390 400 410 170 180 190 200 210 220 KIAA13 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLT 420 430 440 450 460 470 230 240 250 260 270 280 KIAA13 ENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH 480 490 500 510 520 530 290 300 310 320 330 340 KIAA13 EEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAF 540 550 560 570 580 590 350 360 370 380 390 400 KIAA13 TDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTP 600 610 620 630 640 650 410 420 430 440 450 460 KIAA13 PTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVE 660 670 680 690 700 710 470 480 490 500 510 520 KIAA13 EEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEK 720 730 740 750 760 770 530 540 550 560 570 580 KIAA13 LTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLL 780 790 800 810 820 830 590 600 610 620 630 640 KIAA13 RLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLF 840 850 860 870 880 890 650 660 670 680 690 700 KIAA13 NDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEA 900 910 920 930 940 950 710 720 730 740 750 760 KIAA13 ISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDF 960 970 980 990 1000 1010 770 KIAA13 HRLVF ::::: gi|148 HRLVF >>gi|46577708|sp|Q9P2H5.2|UBP35_HUMAN RecName: Full=Ubiq (1017 aa) initn: 5055 init1: 5055 opt: 5055 Z-score: 4900.6 bits: 917.9 E(): 0 Smith-Waterman score: 5055; 99.338% identity (99.868% similar) in 755 aa overlap (19-773:263-1017) 10 20 30 40 KIAA13 PLGCPHPSILGVPCPCVTVTPLTRMIDWVSWPLGKNIDKWIIALLKGL .: ..::::::::::::::::::::::::: gi|465 ASVVQHLPLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGL 240 250 260 270 280 290 50 60 70 80 90 100 KIAA13 AAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 AAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPP 300 310 320 330 340 350 110 120 130 140 150 160 KIAA13 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLL 360 370 380 390 400 410 170 180 190 200 210 220 KIAA13 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLT ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|465 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASEFRHCVLRLT 420 430 440 450 460 470 230 240 250 260 270 280 KIAA13 ENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 ENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH 480 490 500 510 520 530 290 300 310 320 330 340 KIAA13 EEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 EEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAF 540 550 560 570 580 590 350 360 370 380 390 400 KIAA13 TDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 TDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTP 600 610 620 630 640 650 410 420 430 440 450 460 KIAA13 PTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 PTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVE 660 670 680 690 700 710 470 480 490 500 510 520 KIAA13 EEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 EEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEK 720 730 740 750 760 770 530 540 550 560 570 580 KIAA13 LTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 LTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLL 780 790 800 810 820 830 590 600 610 620 630 640 KIAA13 RLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 RLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLF 840 850 860 870 880 890 650 660 670 680 690 700 KIAA13 NDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 NDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEA 900 910 920 930 940 950 710 720 730 740 750 760 KIAA13 ISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 ISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDF 960 970 980 990 1000 1010 770 KIAA13 HRLVF ::::: gi|465 HRLVF >>gi|168278867|dbj|BAG11313.1| ubiquitin carboxyl-termin (749 aa) initn: 5045 init1: 5045 opt: 5045 Z-score: 4892.5 bits: 916.0 E(): 0 Smith-Waterman score: 5045; 100.000% identity (100.000% similar) in 749 aa overlap (25-773:1-749) 10 20 30 40 50 60 KIAA13 PLGCPHPSILGVPCPCVTVTPLTRMIDWVSWPLGKNIDKWIIALLKGLAAVKKFSILIEV :::::::::::::::::::::::::::::::::::: gi|168 MIDWVSWPLGKNIDKWIIALLKGLAAVKKFSILIEV 10 20 30 70 80 90 100 110 120 KIAA13 SLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 GTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSEL 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 AGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQ 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 WLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 WLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQK 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 LKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPER 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 CRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 CRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 EAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEK 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 EAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESC 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 ASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAY 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 DLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 DLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFES 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 VSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQ 640 650 660 670 680 690 730 740 750 760 770 KIAA13 EKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF 700 710 720 730 740 >>gi|119595462|gb|EAW75056.1| hCG27473 [Homo sapiens] (749 aa) initn: 5039 init1: 5039 opt: 5039 Z-score: 4886.7 bits: 914.9 E(): 0 Smith-Waterman score: 5039; 99.866% identity (99.866% similar) in 749 aa overlap (25-773:1-749) 10 20 30 40 50 60 KIAA13 PLGCPHPSILGVPCPCVTVTPLTRMIDWVSWPLGKNIDKWIIALLKGLAAVKKFSILIEV :::::::::::::::::::::::::::::::::::: gi|119 MIDWVSWPLGKNIDKWIIALLKGLAAVKKFSILIEV 10 20 30 70 80 90 100 110 120 KIAA13 SLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA13 GTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSEL 100 110 120 130 140 150 190 200 210 220 230 240 KIAA13 AGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQ 160 170 180 190 200 210 250 260 270 280 290 300 KIAA13 WLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQK 220 230 240 250 260 270 310 320 330 340 350 360 KIAA13 LKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPER 280 290 300 310 320 330 370 380 390 400 410 420 KIAA13 CRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA13 EAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEK 400 410 420 430 440 450 490 500 510 520 530 540 KIAA13 EAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESC 460 470 480 490 500 510 550 560 570 580 590 600 KIAA13 ASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAY 520 530 540 550 560 570 610 620 630 640 650 660 KIAA13 DLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFES :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|119 DLCSVVVHSGVSSESGHYYCYAREGAARPAPSLGTADRPEPENQWYLFNDTRVSFSSFES 580 590 600 610 620 630 670 680 690 700 710 720 KIAA13 VSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQ 640 650 660 670 680 690 730 740 750 760 770 KIAA13 EKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF 700 710 720 730 740 >>gi|149257589|ref|XP_891616.2| PREDICTED: ubiquitin spe (1009 aa) initn: 2396 init1: 2343 opt: 4199 Z-score: 4070.9 bits: 764.4 E(): 0 Smith-Waterman score: 4253; 85.205% identity (92.338% similar) in 757 aa overlap (19-773:264-1009) 10 20 30 40 KIAA13 PLGCPHPSILGVPCPCVTVTPLTRMIDWVSWPLGKNIDKWIIALLKGL .: ..::::::::::::::::::::::::: gi|149 ASVVQHLPLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGL 240 250 260 270 280 290 50 60 70 80 90 100 KIAA13 AAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPP ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 AAVKKFSILIEVSLAKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPA 300 310 320 330 340 350 110 120 130 140 150 160 KIAA13 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLL :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|149 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHIPNEDRIKQLL 360 370 380 390 400 410 170 180 190 200 210 220 KIAA13 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLT :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|149 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSVLQALFMASDFRHCVLRLT 420 430 440 450 460 470 230 240 250 260 270 280 KIAA13 ENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 ENNSQPLMTKLQWLFAFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH 480 490 500 510 520 530 290 300 310 320 330 340 KIAA13 EEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAF :::::: :::::::::: ::: :: :. ..:::::::::::::::::: ::::::::::: gi|149 EEEKTGMRICQKLKQSSLPSPQEELPSSNATSVEKMFGGKIVTRICCLHCLNVSSREEAF 540 550 560 570 580 590 350 360 370 380 390 400 KIAA13 TDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTP :::::::::::: :.::::::: ::::. ..:: . .: : .::::.::: :.: gi|149 TDLSLAFPPPERSRHRRLGSVMLPTEDVRVQEL-----TLAPRAPGAQRQRKRCITGDAP 600 610 620 630 640 410 420 430 440 450 460 KIAA13 PTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVE :.: ::.:. .::.:.:: ..:::. :::... ... :::.:: : :.:. :: . gi|149 RTGLDSEGVDTIGTGGRSGQE-KVEREQAGKEKEVAEDR---EEEGTR-EEEKEEGEEKD 650 660 670 680 690 700 470 480 490 500 510 520 KIAA13 EEEEKVEKETEKEAE--QEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSP .:.:: : : ::::: .::: :::: ::: .:: : :.::: :::::::::::::::: gi|149 KEKEKKEDEKEKEAENGKEKEGDSLGPGTHREAATPPREQTCGPEGSRSVLDLVNYFLSP 710 720 730 740 750 760 530 540 550 560 570 580 KIAA13 EKLTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPL :.:::::::::::::::::::::::::::: :::::::::::::::::::::::::.::: gi|149 ERLTAENRYYCESCASLQDAEKVVELSQGPRYLILTLLRFSFDLRTMRRRKILDDVTIPL 770 780 790 800 810 820 590 600 610 620 630 640 KIAA13 LLRLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWY :::::::::.:::::::::::::::::::::::::::::::::: ::...::::::::: gi|149 LLRLPLAGGQGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAPVLGSTERPEPENQWY 830 840 850 860 870 880 650 660 670 680 690 700 KIAA13 LFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLM ::::::::.::::::::::::::::::::::::::::: : :: :: :::.::::::::: gi|149 LFNDTRVSYSSFESVSNVTSFFPKDTAYVLFYRQRPREDPAAEPGSPRVRAEPTLHKDLM 890 900 910 920 930 940 710 720 730 740 750 760 KIAA13 EAISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGG :::::::.::::::::::::::::::.::. :::::::::::::::::::::::::::: gi|149 EAISKDNVLYLQEQEKEARSRAAYISTLPAPPHWGRGFDEDKDEDEGSPGGCNPAGGNG- 950 960 970 980 990 1000 770 KIAA13 DFHRLVF ::::::: gi|149 DFHRLVF >>gi|193786370|dbj|BAG51653.1| unnamed protein product [ (586 aa) initn: 3921 init1: 3921 opt: 3921 Z-score: 3804.4 bits: 714.3 E(): 3.3e-203 Smith-Waterman score: 3921; 98.976% identity (99.659% similar) in 586 aa overlap (188-773:1-586) 160 170 180 190 200 210 KIAA13 VPNEDRIKQLLGQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMA :::::::::::::::::::::::::::::: gi|193 MAKSDTGKIGLINLGNTCYVNSILQALFMA 10 20 30 220 230 240 250 260 270 KIAA13 SDFRHCVLRLTENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCS ::::::::::::::::::::::.::::::::::::::::::.:::::::::::::::::: gi|193 SDFRHCVLRLTENNSQPLMTKLRWLFGFLEHSQRPAISPENLLSASWTPWFSPGTQQDCS 40 50 60 70 80 90 280 290 300 310 320 330 KIAA13 EYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLC ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 EYLKYLLGRLHEEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLC 100 110 120 130 140 150 340 350 360 370 380 390 KIAA13 CLNVSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 CLNVSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRR 160 170 180 190 200 210 400 410 420 430 440 450 KIAA13 QRKHCITEDTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 QRKHCITEDTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRG 220 230 240 250 260 270 460 470 480 490 500 510 KIAA13 EGEREKEEEVEEEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVL :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|193 EGEREKEEEVEEEEEKVEKETEKEAEQEKEEDSLGVGTHPDAAIPSGERTCGSEGSRSVL 280 290 300 310 320 330 520 530 540 550 560 570 KIAA13 DLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRK ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|193 DLVNYFLSPEKLTAKNRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRK 340 350 360 370 380 390 580 590 600 610 620 630 KIAA13 ILDDVSIPLLLRLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTAD ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|193 ILDDVSIPLLLRLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAPSLGTAD 400 410 420 430 440 450 640 650 660 670 680 690 KIAA13 RPEPENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 RPEPENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRT 460 470 480 490 500 510 700 710 720 730 740 750 KIAA13 EPTLHKDLMEAISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 EPTLHKDLMEAISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGG 520 530 540 550 560 570 760 770 KIAA13 CNPAGGNGGDFHRLVF :::::::::::::::: gi|193 CNPAGGNGGDFHRLVF 580 >>gi|124297049|gb|AAI31490.1| USP35 protein [Homo sapien (604 aa) initn: 3755 init1: 3755 opt: 3755 Z-score: 3643.3 bits: 684.5 E(): 3.1e-194 Smith-Waterman score: 3755; 99.640% identity (99.820% similar) in 556 aa overlap (218-773:49-604) 190 200 210 220 230 240 KIAA13 MAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQWLFGFLE :.:::::::::::::::::::::::::::: gi|124 PSQTRARLVSSTWATHAMSTASFRPYSWRLSSFRHCVLRLTENNSQPLMTKLQWLFGFLE 20 30 40 50 60 70 250 260 270 280 290 300 KIAA13 HSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 HSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSP 80 90 100 110 120 130 310 320 330 340 350 360 KIAA13 SPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPERCRRRRLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 SPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPERCRRRRLG 140 150 160 170 180 190 370 380 390 400 410 420 KIAA13 SVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEAGGQSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 SVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEAGGQSS 200 210 220 230 240 250 430 440 450 460 470 480 KIAA13 QEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 QEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQEKE 260 270 280 290 300 310 490 500 510 520 530 540 KIAA13 EDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESCASLQDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESCASLQDAE 320 330 340 350 360 370 550 560 570 580 590 600 KIAA13 KVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAYDLCSVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAYDLCSVVV 380 390 400 410 420 430 610 620 630 640 650 660 KIAA13 HSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFESVSNVTSF ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|124 HSGVSSESGHYYCYAREGAARPAPSLGTADRPEPENQWYLFNDTRVSFSSFESVSNVTSF 440 450 460 470 480 490 670 680 690 700 710 720 KIAA13 FPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQEKEARSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQEKEARSR 500 510 520 530 540 550 730 740 750 760 770 KIAA13 AAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF :::::::::::::::::::::::::::::::::::::::::::::: gi|124 AAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF 560 570 580 590 600 >>gi|119918846|ref|XP_604057.3| PREDICTED: similar to ub (677 aa) initn: 2144 init1: 2050 opt: 3706 Z-score: 3595.2 bits: 675.8 E(): 1.5e-191 Smith-Waterman score: 3737; 82.799% identity (90.816% similar) in 686 aa overlap (102-773:1-677) 80 90 100 110 120 130 KIAA13 LLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNSGTSCLEQLAEL :::::::::::::::::::::::::::::: gi|119 LLPHIPPMVASLVKEDSNSGTSCLEQLAEL 10 20 30 140 150 160 170 180 190 KIAA13 VHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSELAGFYPRLMAKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSELAGFYPRLMAKS 40 50 60 70 80 90 200 210 220 230 240 250 KIAA13 DTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQWLFGFLEHSQR ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|119 DTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQWLFAFLEHSQR 100 110 120 130 140 150 260 270 280 290 300 310 KIAA13 PAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPE 160 170 180 190 200 210 320 330 340 350 360 KIAA13 EPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPERCRR-------- :::.::.:::::::::::::::::: :::::::::::::::::::::::::: gi|119 EPPGPSATSVEKMFGGKIVTRICCLRCLNVSSREEAFTDLSLAFPPPERCRRHHHHHHHR 220 230 240 250 260 270 370 380 390 400 410 420 KIAA13 -RRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEA ::::::: :.:: ..:: :: .::::::::::: .::: : .::: . gi|119 RRRLGSVMLPAED---------AGAQEPGSAGPRRQRKHCITGGVPPTILDMEGLGPHGL 280 290 300 310 320 430 440 450 460 470 KIAA13 GGQSSQEERIEREEEGKEERT--EKEEVGEEEESTRGEGEREKEEEVEEEEEKV-EKETE ::::.:::..:: : .::.. :.:: ::::....: :.. ::: .::::: ::: : gi|119 GGQSGQEEKVERGESTEEEEAAGEEEEEEEEEEKVKAEVEEKVEEEKVKEEEKVKEKEKE 330 340 350 360 370 380 480 490 500 510 520 530 KIAA13 KEAEQEKEEDSLG--AGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYC :::..::: . : :.. : . .. . ...::::::::::::::::.::.::::.: gi|119 KEAQEEKEAAADGEEAAAGPGPGTLQSAAAASGDGSRSVLDLVNYFLSPERLTSENRYHC 390 400 410 420 430 440 540 550 560 570 580 590 KIAA13 ESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRG ::::::::::::::::::: ::::::::::::::::::::::::::.::::::::::::: gi|119 ESCASLQDAEKVVELSQGPRYLILTLLRFSFDLRTMRRRKILDDVSVPLLLRLPLAGGRG 450 460 470 480 490 500 600 610 620 630 640 650 KIAA13 QAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSS :::::::::::::.::::::::::::::::::: .::.:.::::.::::::::::::::: gi|119 QAYDLCSVVVHSGLSSESGHYYCYAREGAARPAPALGAAERPEPDNQWYLFNDTRVSFSS 510 520 530 540 550 560 660 670 680 690 700 710 KIAA13 FESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYL :::::::::::::::::::::::::.:: ::: :: :.:.::::::::::::::::::.: gi|119 FESVSNVTSFFPKDTAYVLFYRQRPEEGSEAEPGSPRTRAEPTLHKDLMEAISKDNILFL 570 580 590 600 610 620 720 730 740 750 760 770 KIAA13 QEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF ::::::::::::::::::.:::: ::::.:::::.: ::::.::::.::::.:::: gi|119 QEQEKEARSRAAYISALPASPHWRRGFDDDKDEDKGPPGGCGPAGGSGGDFNRLVF 630 640 650 660 670 >>gi|126327730|ref|XP_001362965.1| PREDICTED: similar to (1036 aa) initn: 2966 init1: 2101 opt: 3077 Z-score: 2983.2 bits: 563.2 E(): 1.8e-157 Smith-Waterman score: 3789; 75.616% identity (87.419% similar) in 771 aa overlap (19-773:268-1036) 10 20 30 40 KIAA13 PLGCPHPSILGVPCPCVTVTPLTRMIDWVSWPLGKNIDKWIIALLKGL .: ..:::::: ::::::::::::.::::: gi|126 ASVVQYVPLELMDGVIRNLTNDDSITDAQMMTAISRMIDWVCWPLGKNIDKWIITLLKGL 240 250 260 270 280 290 50 60 70 80 90 100 KIAA13 AAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPP ::::::::::::::.::::::::::::::: :::::::::::.:::::::::::::::: gi|126 AAVKKFSILIEVSLSKIEKVFSKLLYPIVREAALSVLKYMLLSFQHSHEAFHLLLPHIPK 300 310 320 330 340 350 110 120 130 140 150 160 KIAA13 MVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLL :::::..::::: ..:::.::::.::::::: :::::::::::::::::::::::::::: gi|126 MVASLAEEDSNSRANCLEELAELIHCMVFRFSGFPDLYEPVMEAIKDLHVPNEDRIKQLL 360 370 380 390 400 410 170 180 190 200 210 220 KIAA13 GQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLT ::.::::::.::. ::::: ::::::::::::::::::.::..::::::::::::::.: gi|126 GQNAWTSQKNELVCFYPRLAAKSDTGKIGLINLGNTCYMNSVIQALFMASDFRHCVLHLP 420 430 440 450 460 470 230 240 250 260 270 280 KIAA13 ENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLH :.:::::::::::::.:::::::::.:::.:::::::::::::.:::::::::::::::: gi|126 EDNSQPLMTKLQWLFAFLEHSQRPAVSPESFLSASWTPWFSPGAQQDCSEYLKYLLDRLH 480 490 500 510 520 530 290 300 310 320 330 340 KIAA13 EEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAF :::::: ::::::::::.::: .: : : :..:::::::::::: :: :::::.::::: gi|126 EEEKTGKRICQKLKQSSTPSPSDEQPNLSPTAIEKMFGGKIVTRIRCLRCLNVSTREEAF 540 550 560 570 580 590 350 360 370 380 390 400 KIAA13 TDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTP ::::::::::.: ::::::::: :.::: .. : :...:. : : ::::::::. :. gi|126 TDLSLAFPPPDR-RRRRLGSVMLPVEDIRVQGTPSPAKTQAMGSEGSRRQRKHCIAGDAL 600 610 620 630 640 650 410 420 430 440 450 460 KIAA13 PTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVE : . :: : .: : ..........::: :.: .:::. .::: . : :...::.:: gi|126 PPLVNIEILGFQEPGRKKAEKKEVKKEEEEKKEMKKKEEMKKEEEEKKKEVEKREEEKVE 660 670 680 690 700 710 470 480 490 500 510 520 KIAA13 EEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEK ..::: : : .:: ..:::: :: : . .. ::. :: :::::: ::.::::::: gi|126 RKEEKKEME-KKEMKEEKEEGCLGPRTGGNQGVACGEQMCGPEGSRSVPDLLNYFLSPET 720 730 740 750 760 770 530 540 550 560 570 580 KIAA13 LTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLL :::::::.:: ::::::::::::::.:: ::::::::::::::::::.::::.:::::.: gi|126 LTAENRYHCEHCASLQDAEKVVELSEGPRYLILTLLRFSFDLRTMRRKKILDNVSIPLFL 780 790 800 810 820 830 590 600 610 620 630 KIAA13 RLPLAGG-----RGQA---YDLCSVVVHSGVSSESGHYYCYAREGA-AR--PAASLGTAD :::..:: .::: :::::::::::.::::::::::::::: :: :: : : . gi|126 RLPVGGGCPQQDQGQACAAYDLCSVVVHSGISSESGHYYCYAREGATARVNPARSPGLSP 840 850 860 870 880 890 640 650 660 670 680 690 KIAA13 RPEP---ENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSR . :.:::::::::::::::::::::::::::::::::::::: ::: :: : : gi|126 AEKLSGLESQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRAREGLAAEPKSPR 900 910 920 930 940 950 700 710 720 730 740 750 KIAA13 VRTEPTLHKDLMEAISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDED-EG ..::::::::.:::::::::::::::::::::.::::.:: :: ::: :::::::: :: gi|126 PHSEPTLHKDLIEAISKDNILYLQEQEKEARSRSAYISTLPKSPPWGRDFDEDKDEDDEG 960 970 980 990 1000 1010 760 770 KIAA13 SPGGCNPA-GGNGGDFHRLVF :::::.:: ::.:..:::::: gi|126 SPGGCDPAAGGSGSSFHRLVF 1020 1030 >>gi|194375095|dbj|BAG62660.1| unnamed protein product [ (450 aa) initn: 3010 init1: 3010 opt: 3010 Z-score: 2922.7 bits: 550.8 E(): 4.3e-154 Smith-Waterman score: 3010; 99.333% identity (99.556% similar) in 450 aa overlap (324-773:1-450) 300 310 320 330 340 350 KIAA13 GTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSL :::::::::::::::::::::::::::::: gi|194 MFGGKIVTRICCLCCLNVSSREEAFTDLSL 10 20 30 360 370 380 390 400 410 KIAA13 AFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLY 40 50 60 70 80 90 420 430 440 450 460 470 KIAA13 IEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEK ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|194 IEGLDSKEAGGQSSQEERVEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEK 100 110 120 130 140 150 480 490 500 510 520 530 KIAA13 VEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAEN :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|194 VEKETEKEAEQEKEEDSLRAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAEN 160 170 180 190 200 210 540 550 560 570 580 590 KIAA13 RYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLA 220 230 240 250 260 270 600 610 620 630 640 650 KIAA13 GGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRV ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|194 GGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAPSLGTADRPEPENQWYLFNDTRV 280 290 300 310 320 330 660 670 680 690 700 710 KIAA13 SFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDN 340 350 360 370 380 390 720 730 740 750 760 770 KIAA13 ILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF 400 410 420 430 440 450 773 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 13:55:25 2009 done: Wed Mar 4 13:59:03 2009 Total Scan time: 1585.290 Total Display time: 0.420 Function used was FASTA [version 34.26.5 April 26, 2007]