# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj03325.fasta.nr -Q ../query/KIAA1371.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA1371, 395 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7827178 sequences
Expectation_n fit: rho(ln(x))= 5.2768+/-0.000183; mu= 10.2553+/- 0.010
mean_var=72.5554+/-13.965, 0's: 38 Z-trim: 41 B-trim: 0 in 0/65
Lambda= 0.150570
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|150378498|ref|NP_056127.2| hypothetical protein (5005) 2334 516.8 4.2e-143
gi|109075552|ref|XP_001102884.1| PREDICTED: simila (5007) 2322 514.2 2.6e-142
gi|114595921|ref|XP_517422.2| PREDICTED: similar t (5005) 2317 513.1 5.5e-142
gi|34530822|dbj|BAC85988.1| unnamed protein produc (1168) 2306 510.2 9.1e-142
gi|73984100|ref|XP_540963.2| PREDICTED: similar to (4944) 2313 512.2 9.9e-142
gi|26326065|dbj|BAC26776.1| unnamed protein produc ( 815) 2272 502.8 1.1e-139
gi|123263513|emb|CAM24475.1| novel protein [Mus mu (1160) 2272 502.9 1.5e-139
gi|123262477|emb|CAM28071.1| novel protein [Mus mu (1160) 2272 502.9 1.5e-139
gi|116283858|gb|AAH34738.1| 4932438A13Rik protein (1161) 2272 502.9 1.5e-139
gi|123262475|emb|CAM28069.1| novel protein [Mus mu (1200) 2272 502.9 1.5e-139
gi|123263516|emb|CAM24478.1| novel protein [Mus mu (1200) 2272 502.9 1.5e-139
gi|149251098|ref|XP_980288.2| PREDICTED: similar t (5005) 2272 503.3 4.8e-139
gi|149250853|ref|XP_001475283.1| PREDICTED: hypoth (5005) 2272 503.3 4.8e-139
gi|148703143|gb|EDL35090.1| mCG12673, isoform CRA_ (4517) 2271 503.0 5.2e-139
gi|149250964|ref|XP_001481350.1| PREDICTED: simila (5012) 2271 503.1 5.6e-139
gi|123262476|emb|CAM28070.1| novel protein [Mus mu (1469) 2253 498.8 3.2e-138
gi|123263512|emb|CAM24474.1| novel protein [Mus mu (1469) 2253 498.8 3.2e-138
gi|126330714|ref|XP_001370606.1| PREDICTED: simila (5015) 2203 488.3 1.6e-134
gi|149048747|gb|EDM01288.1| rCG41517 [Rattus norve (1237) 2156 477.7 6.1e-132
gi|149411993|ref|XP_001513983.1| PREDICTED: simila (5012) 2109 467.9 2.2e-128
gi|118090322|ref|XP_420625.2| PREDICTED: similar t (5040) 2020 448.6 1.5e-122
gi|74201520|dbj|BAE28401.1| unnamed protein produc ( 837) 1878 417.2 6.8e-114
gi|26324652|dbj|BAC26080.1| unnamed protein produc ( 877) 1878 417.2 7e-114
gi|123262474|emb|CAM28068.1| novel protein [Mus mu ( 877) 1878 417.2 7e-114
gi|148703146|gb|EDL35093.1| mCG12673, isoform CRA_ ( 877) 1877 417.0 8.2e-114
gi|109464758|ref|XP_342232.3| PREDICTED: similar t ( 873) 1856 412.4 1.9e-112
gi|47214605|emb|CAF94276.1| unnamed protein produc (3855) 1524 340.7 3.2e-90
gi|119625644|gb|EAX05239.1| hCG2039106, isoform CR ( 507) 1120 252.4 1.7e-64
gi|220679012|emb|CAX13113.1| novel protein [Danio (4922) 1097 248.0 3.3e-62
gi|110645672|gb|AAI18758.1| Hypothetical protein M ( 765) 861 196.2 2e-47
gi|167866935|gb|EDS30318.1| conserved hypothetical (1805) 738 169.8 4.4e-39
gi|108875125|gb|EAT39350.1| conserved hypothetical (1704) 726 167.1 2.6e-38
gi|193905380|gb|EDW04247.1| GH11695 [Drosophila gr (1958) 662 153.3 4.4e-34
gi|194117802|gb|EDW39845.1| GL14210 [Drosophila pe (1769) 661 153.0 4.7e-34
gi|198138908|gb|EAL34151.2| GA13519 [Drosophila ps (1769) 661 153.0 4.7e-34
gi|190615435|gb|EDV30959.1| GF14778 [Drosophila an (2023) 653 151.3 1.7e-33
gi|194191705|gb|EDX05281.1| GD24093 [Drosophila si (2003) 645 149.6 5.7e-33
gi|194134010|gb|EDW55526.1| GM17219 [Drosophila se (2010) 645 149.6 5.8e-33
gi|190657665|gb|EDV54878.1| GG21069 [Drosophila er (2028) 645 149.6 5.8e-33
gi|7298359|gb|AAF53586.1| CG15133 [Drosophila mela (2042) 645 149.6 5.8e-33
gi|194176596|gb|EDW90207.1| GE12778 [Drosophila ya (1761) 641 148.7 9.5e-33
gi|194156040|gb|EDW71224.1| GJ16181 [Drosophila vi (1978) 637 147.9 1.9e-32
gi|47202194|emb|CAF87851.1| unnamed protein produc ( 171) 617 142.8 5.5e-32
gi|157015100|gb|EAA12858.4| AGAP007961-PA [Anophel (1727) 512 120.7 2.5e-24
gi|210113432|gb|EEA61200.1| hypothetical protein B ( 843) 455 108.1 7.7e-21
gi|193912571|gb|EDW11438.1| GI17139 [Drosophila mo (1984) 455 108.3 1.5e-20
gi|198431411|ref|XP_002122913.1| PREDICTED: simila (4603) 445 106.4 1.3e-19
gi|156211247|gb|EDO32365.1| predicted protein [Nem ( 720) 426 101.7 5.3e-19
gi|212512119|gb|EEB14951.1| hypothetical protein P (4920) 434 104.0 7.4e-19
gi|115725253|ref|XP_790929.2| PREDICTED: similar t (1414) 400 96.3 4.6e-17
>>gi|150378498|ref|NP_056127.2| hypothetical protein LOC (5005 aa)
initn: 2357 init1: 2334 opt: 2334 Z-score: 2725.3 bits: 516.8 E(): 4.2e-143
Smith-Waterman score: 2334; 99.708% identity (100.000% similar) in 343 aa overlap (1-343:590-932)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
::::::::::::::::::::::::::::::
gi|150 TLNIDFSLPFTDFVPATCNTKFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
560 570 580 590 600 610
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
620 630 640 650 660 670
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
680 690 700 710 720 730
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
740 750 760 770 780 790
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
800 810 820 830 840 850
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
860 870 880 890 900 910
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|150 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIICQHGIDRRFCESKLSCIP
920 930 940 950 960 970
>>gi|109075552|ref|XP_001102884.1| PREDICTED: similar to (5007 aa)
initn: 2345 init1: 2322 opt: 2322 Z-score: 2711.2 bits: 514.2 E(): 2.6e-142
Smith-Waterman score: 2322; 98.834% identity (100.000% similar) in 343 aa overlap (1-343:590-932)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
:::::::::::::::::::.::::::::::
gi|109 TLNIDFSLPFTDFVPATCNTKFSLRGEDVDLHLFLPDCHPSKYSLFMLVRNCHPNKMIHD
560 570 580 590 600 610
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|109 TGIPAECQSGQKTVKPKWRNVTQEKAGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
620 630 640 650 660 670
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
gi|109 LSEMEETMLSVLRPSQKASDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
680 690 700 710 720 730
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
740 750 760 770 780 790
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
800 810 820 830 840 850
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
860 870 880 890 900 910
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|109 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIICQHGIDRRFCESKLSCIP
920 930 940 950 960 970
>>gi|114595921|ref|XP_517422.2| PREDICTED: similar to fr (5005 aa)
initn: 2340 init1: 2317 opt: 2317 Z-score: 2705.3 bits: 513.1 E(): 5.5e-142
Smith-Waterman score: 2317; 99.125% identity (99.708% similar) in 343 aa overlap (1-343:590-932)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
::::::::::::::::::::::::::::::
gi|114 TLNIDFSLPFTDFVPATCNTKFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
560 570 580 590 600 610
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
620 630 640 650 660 670
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
gi|114 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPSDKLHVEMELSPDSQITLYG
680 690 700 710 720 730
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
gi|114 PLLNAFLCIKENYFGEDDMYVDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
740 750 760 770 780 790
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
800 810 820 830 840 850
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
860 870 880 890 900 910
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|114 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIICQHGIDRRFCESKLSCIP
920 930 940 950 960 970
>>gi|34530822|dbj|BAC85988.1| unnamed protein product [H (1168 aa)
initn: 2345 init1: 1939 opt: 2306 Z-score: 2701.4 bits: 510.2 E(): 9.1e-142
Smith-Waterman score: 2306; 99.125% identity (99.417% similar) in 343 aa overlap (1-343:344-685)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
::::::::::::::::::::::::::::::
gi|345 TLNIDFSLPFTDFVPATCNTKFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
320 330 340 350 360 370
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|345 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
380 390 400 410 420 430
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|345 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
440 450 460 470 480 490
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|345 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
500 510 520 530 540 550
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
gi|345 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQPIL
560 570 580 590 600 610
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
gi|345 SPLNVFVSDNYQ-RPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
620 630 640 650 660 670
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|345 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIICQHGIDRRFCESKLSCIP
680 690 700 710 720 730
>>gi|73984100|ref|XP_540963.2| PREDICTED: similar to CG1 (4944 aa)
initn: 2339 init1: 2313 opt: 2313 Z-score: 2700.7 bits: 512.2 E(): 9.9e-142
Smith-Waterman score: 2313; 98.251% identity (99.708% similar) in 343 aa overlap (1-343:529-871)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
::::::::::::::::::::::::::: ::
gi|739 TLNIDFSLPFTDFVPATCNTKFTLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMTHD
500 510 520 530 540 550
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
gi|739 TGIPAECQSGQKTVKPKWRNITQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
560 570 580 590 600 610
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
620 630 640 650 660 670
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|739 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENESSAKS
680 690 700 710 720 730
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|739 IHPLTLRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLVL
740 750 760 770 780 790
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
800 810 820 830 840 850
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|739 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIICQHGFDRRFCESKLSCIP
860 870 880 890 900 910
>>gi|26326065|dbj|BAC26776.1| unnamed protein product [M (815 aa)
initn: 2330 init1: 2272 opt: 2272 Z-score: 2663.7 bits: 502.8 E(): 1.1e-139
Smith-Waterman score: 2272; 95.918% identity (99.125% similar) in 343 aa overlap (1-343:204-546)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
:::::::::::::::::::::::::::. .
gi|263 TLNIDFSLPFTDFVPATCNTRFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMVPE
180 190 200 210 220 230
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|263 TGIPAECQSGQKTVKPKWRNVTQEKAGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
240 250 260 270 280 290
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::.::::.::::::: : :::.::::::::::::::::::::::::::
gi|263 LSEMEETMLSVLRPAQKTSERVVSSPSMSPRPPVDPSELPPDKLHVEMELSPDSQITLYG
300 310 320 330 340 350
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
:::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::
gi|263 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMDNDKRENESSAKS
360 370 380 390 400 410
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|263 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLVL
420 430 440 450 460 470
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
480 490 500 510 520 530
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|263 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIVCQHGIDRRFCESKLSCIP
540 550 560 570 580 590
>>gi|123263513|emb|CAM24475.1| novel protein [Mus muscul (1160 aa)
initn: 2330 init1: 2272 opt: 2272 Z-score: 2661.6 bits: 502.9 E(): 1.5e-139
Smith-Waterman score: 2272; 95.918% identity (99.125% similar) in 343 aa overlap (1-343:330-672)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
:::::::::::::::::::::::::::. .
gi|123 TLNIDFSLPFTDFVPATCNTRFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMVPE
300 310 320 330 340 350
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|123 TGIPAECQSGQKTVKPKWRNVTQEKAGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
360 370 380 390 400 410
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::.::::.::::::: : :::.::::::::::::::::::::::::::
gi|123 LSEMEETMLSVLRPAQKTSERVVSSPSMSPRPPVDPSELPPDKLHVEMELSPDSQITLYG
420 430 440 450 460 470
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
:::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::
gi|123 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMDNDKRENESSAKS
480 490 500 510 520 530
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|123 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLVL
540 550 560 570 580 590
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
600 610 620 630 640 650
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|123 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIVCQHGIDRRFCESKLSCIP
660 670 680 690 700 710
>>gi|123262477|emb|CAM28071.1| novel protein [Mus muscul (1160 aa)
initn: 2325 init1: 2272 opt: 2272 Z-score: 2661.6 bits: 502.9 E(): 1.5e-139
Smith-Waterman score: 2272; 95.918% identity (99.125% similar) in 343 aa overlap (1-343:330-672)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
:::::::::::::::::::::::::::. .
gi|123 TLNIDFSLPFTDFVPATCNTRFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMVPE
300 310 320 330 340 350
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|123 TGIPAECQSGQKTVKPKWRNVTQEKAGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
360 370 380 390 400 410
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::.::::.:::::: :: :::.::::::::::::::::::::::::::
gi|123 LSEMEETMLSVLRPAQKTSERVVSSPCTSPRPPVDPSELPPDKLHVEMELSPDSQITLYG
420 430 440 450 460 470
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
:::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::
gi|123 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMDNDKRENESSAKS
480 490 500 510 520 530
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|123 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLVL
540 550 560 570 580 590
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
600 610 620 630 640 650
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|123 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIVCQHGIDRRFCESKLSCIP
660 670 680 690 700 710
>>gi|116283858|gb|AAH34738.1| 4932438A13Rik protein [Mus (1161 aa)
initn: 2330 init1: 2272 opt: 2272 Z-score: 2661.6 bits: 502.9 E(): 1.5e-139
Smith-Waterman score: 2272; 95.918% identity (99.125% similar) in 343 aa overlap (1-343:330-672)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
:::::::::::::::::::::::::::. .
gi|116 TLNIDFSLPFTDFVPATCNTRFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMVPE
300 310 320 330 340 350
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|116 TGIPAECQSGQKTVKPKWRNVTQEKAGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
360 370 380 390 400 410
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::.::::.::::::: : :::.::::::::::::::::::::::::::
gi|116 LSEMEETMLSVLRPAQKTSERVVSSPSMSPRPPVDPSELPPDKLHVEMELSPDSQITLYG
420 430 440 450 460 470
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
:::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::
gi|116 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMDNDKRENESSAKS
480 490 500 510 520 530
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|116 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLVL
540 550 560 570 580 590
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
600 610 620 630 640 650
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|116 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIVCQHGIDRRFCESKLSCIP
660 670 680 690 700 710
>>gi|123262475|emb|CAM28069.1| novel protein [Mus muscul (1200 aa)
initn: 2299 init1: 2272 opt: 2272 Z-score: 2661.3 bits: 502.9 E(): 1.5e-139
Smith-Waterman score: 2272; 95.918% identity (99.125% similar) in 343 aa overlap (1-343:590-932)
10 20 30
KIAA13 LHLFLPDCHPSKYSLFMLVKNCHPNKMIHD
:::::::::::::::::::::::::::. .
gi|123 TLNIDFSLPFTDFVPATCNTRFSLRGEDVDLHLFLPDCHPSKYSLFMLVKNCHPNKMVPE
560 570 580 590 600 610
40 50 60 70 80 90
KIAA13 TGIPAECQSGQKTVKPKWRNVTQEKSGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|123 TGIPAECQSGQKTVKPKWRNVTQEKAGWVECWTVPSVMLTIDYTWHPIYPQKADEQLKQS
620 630 640 650 660 670
100 110 120 130 140 150
KIAA13 LSEMEETMLSVLRPSQKTSDRVVSSPSTSSRPPIDPSELPPDKLHVEMELSPDSQITLYG
::::::::::::::.::::.:::::: :: :::.::::::::::::::::::::::::::
gi|123 LSEMEETMLSVLRPAQKTSERVVSSPCTSPRPPVDPSELPPDKLHVEMELSPDSQITLYG
680 690 700 710 720 730
160 170 180 190 200 210
KIAA13 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMENDKKENEGSAKS
:::::::::::::::::::::::::::::::::::::::::::::::.:::.:::.::::
gi|123 PLLNAFLCIKENYFGEDDMYMDFEEVISSPVLSLSTSSSSGWTAVGMDNDKRENESSAKS
740 750 760 770 780 790
220 230 240 250 260 270
KIAA13 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|123 IHPLALRPWDITVLVNLYKVHGRLPVHGTTDGPECPTAFLERLCFEMKKGFRETMLQLVL
800 810 820 830 840 850
280 290 300 310 320 330
KIAA13 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 SPLNVFVSDNYQQRPPVDEVLREGHINLSGLQLRAHAMFSAEGLPLGSDSLEYAWLIDVQ
860 870 880 890 900 910
340 350 360 370 380 390
KIAA13 AGSLTAKVTAPQVWFSEYYLLTYFLFPFSTHLLKNNLYACLNVHCISTDGILMGVILAIQ
::::::::::::.
gi|123 AGSLTAKVTAPQLACLLEWGQTFVFHVVCREYELERPKSVIVCQHGIDRRFCESKLSCIP
920 930 940 950 960 970
395 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Wed Mar 4 13:50:47 2009 done: Wed Mar 4 13:55:25 2009
Total Scan time: 1453.350 Total Display time: 0.290
Function used was FASTA [version 34.26.5 April 26, 2007]