hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00543670/chunk_1/iprscan-20080502-00543670.nocrc
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Query sequence: KIAA1369
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 143.8    1.8e-38   1
SM00219                                                 -37.3    7.9e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1     190   606 ..     1   280 []   -37.3  7.9e-09
SM00220    1/1     190   606 ..     1   231 []   143.8  1.8e-38

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 190 to 606: score -37.3, E = 7.9e-09
                   *->ltlgkkLGeGaFGeVykGtlk........ieVAVKtLkedakeeFlr
                       + + +LG G +G+Vyk + k +++     +  +K   +   +  lr
    KIAA1369   190    FEELAILGKGGYGRVYKVRNKldgqyyaiKKILIKGATKTVCMKVLR 236  

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymeg..GdL.
                   E k++  l  +HpNiV  + + +         e + ++   ++     L+
    KIAA1369   237 EVKVLAGL--QHPNIVGYHTAWI---------EHVHVIQPRADRaaIELp 275  

                   .ldyLrknrpk.......................................
                   +l+ L + ++++++ + +++++++++    +++++++++ ++++++++++
    KIAA1369   276 sLEVLSDQEEDreqcgvkndesssssiifaeptpekekrfgesdtenqnn 325  

                   ..................................................
                   ++ + +++   +++++ +++ + ++++  + + ++  +++ + +++++ +
    KIAA1369   326 ksvkyttnlviresgelestlelqenglaglsassiveqqlplrrnshle 375  

                   ..................................................
                   ++ ++++++++++ +  ++++ + +   + + +  + +  +   ++++++
    KIAA1369   376 esftsteesseenvnflgqteaqyhlmlhiqmqlcelslwdwivernkrg 425  

                   ...............lslsdLlsfAlQIAkGMeYLesknfvHRDLAARNc
                   ++  +++  +    ++ ++ + +      +G  Y++ +++vHRDL  RN+
    KIAA1369   426 reyvdesacpyvmanVATKIFQELV----EGVFYIHNMGIVHRDLKPRNI 471  

                   Lvgenk.vvKIsDFGLsR.dlyddDkkGeskdyYrkkggkggktllPir.
                    ++ + ++vKI+DFGL+ +d+  +     ++d        g++   P  +
    KIAA1369   472 FLHGPDqQVKIGDFGLACtDILQK-----NTDWTNRN---GKR--TPTHt 511  

                   .......WmAPEslkdgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqf
                   ++ ++    +PE l  +++  kSD +S GV+L E+f    qP   e    
    KIAA1369   512 srvgtclYASPEQLEGSEYDAKSDMYSLGVVLLELF----QPFGTE---- 553  

                   msneevleylkkGyRlpkPendlpiSsvtCPdelYd.lMlqCWaedPedR
                   m+ +evl  l++G  ++                +  + ++   +++ ++R
    KIAA1369   554 MERAEVLTGLRTGQLPESLRK---------RCPVQAkYIQHLTRRNSSQR 594  

                   PtFsel..verl<-*
                   P+  +l + e++   
    KIAA1369   595 PSAIQLlqSELF    606  

SM00220: domain 1 of 1, from 190 to 606: score 143.8, E = 1.8e-38
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik..............
                      +e l +lGkG++G+Vy++r+k +g+++AiK+i  ++ +++   +  +
    KIAA1369   190    FEELAILGKGGYGRVYKVRNKLDGQYYAIKKILikgatktvcmkvlr 236  

                   ..................................................
                   + +   + ++++  + ++   ++ +  +++ ++   + ++ +  ++++++
    KIAA1369   237 evkvlaglqhpnivgyhtawiehvhviqpradraaielpslevlsdqeed 286  

                   ..................................................
                   +++ + +++++++++    +++++++++ ++++++++++++ + +++   
    KIAA1369   287 reqcgvkndesssssiifaeptpekekrfgesdtenqnnksvkyttnlvi 336  

                   .................................erilrEikiLkk..dHP
                   +++++ +++ + ++++  + + ++  +++ + +++   E +  + ++  +
    KIAA1369   337 resgelestlelqenglaglsassiveqqlplrRNSHLEESFTSTeeSSE 386  

                   NIVkLydvfed...dklylVmEyceGdlGdLfdllkkrgrrglrk.....
                     V++++  e + +  l++ m +ce    +L d +++r++rg+ + +++ 
    KIAA1369   387 ENVNFLGQTEAqyhLMLHIQMQLCEL---SLWDWIVERNKRGREYvdesa 433  

                   ..vlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds...hvKla
                    ++   ++a ++f+++++++ Y+H++gI+HRDLKP Ni+L  ++++vK++
    KIAA1369   434 cpYVMAnVATKIFQELVEGVFYIHNMGIVHRDLKPRNIFLHGpdqQVKIG 483  

                   DFGlArql...................ttfvGTpeYmAPEvl...gYgkp
                   DFGlA+    +++++ +++++++++++t+ vGT  Y +PE l+++ Y+  
    KIAA1369   484 DFGLACTDilqkntdwtnrngkrtpthTSRVGTCLYASPEQLegsEYDA- 532  

                   avDiWSlGcilyElltGkpPFp.qldlifkkig..............Spe
                   ++D++SlG++l El+    PF +++++   + g +++  +++ +++ + +
    KIAA1369   533 KSDMYSLGVVLLELFQ---PFGtEMERAEVLTGlrtgqlpeslrkrcPVQ 579  

                   akdLikklLvkdPekRlta.eaLedeldikaHPff<-*
                   ak  i++l +++ ++R++a ++L+        + f   
    KIAA1369   580 AK-YIQHLTRRNSSQRPSAiQLLQ-------SELF    606  

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