hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00480092/chunk_1/iprscan-20080502-00480092.nocrc
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Query sequence: KIAA1365
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                  80.7    1.8e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1     749   829 ..     1    80 []    80.7  1.8e-19

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 749 to 829: score 80.7, E = 1.8e-19
                   *->gglGfsivg..............gifvssvvpGspAakaGrkslglL
                      +glGfsi+g+ ++++++ +++++gifv++v+p++pA+         L
    KIAA1365   749    PGLGFSISGgisgqgnpfkpsdkGIFVTRVQPDGPASNL-------L 788  

                   kvGDvIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   ++GD+Il+ NG  s   + he av+llk+ ++     +v+L+++R+    
    KIAA1365   789 QPGDKILQANG-HSFVHMEHEKAVLLLKSFQN-----TVDLVIQREL    829  

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