hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00462320/chunk_1/iprscan-20080502-00462320.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1364
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00033                                                  72.0    7.4e-17   1
SM00132                                                  52.1    7.4e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00033    1/1     355   454 ..     1   100 []    72.0  7.4e-17
SM00132    1/1     626   680 ..     1    52 []    52.1  7.4e-11

Alignments of top-scoring domains:
SM00033: domain 1 of 1, from 355 to 454: score 72.0, E = 7.4e-17
                   *->eeeallrWinsll......kvtnfssdlkDGvvLckLlnslsPagsv
                      +   ll W+++++++  + +vt+++ ++k+G++Lc+ +++++P +++
    KIAA1364   355    RSSKLLGWCQRQTdgyagvNVTDLTMSWKSGLALCAIIHRYRP-DLI 400  

                   dkkk..rfkkleNinlalsfaeklgafLGvgkvvlfdpeDlvegnenkkl
                   d++  ++++  +N +la+++aek+     +g+ ++ +++++  ++  +++
    KIAA1364   401 DFDSldEQNVEKNNQLAFDIAEKE-----LGISPIMTGKEMASVG--EPD 443  

                   ilgviwtLirl<-*
                    l+ +++L ++   
    KIAA1364   444 KLSMVMYLTQF    454  

SM00132: domain 1 of 1, from 626 to 680: score 52.1, E = 7.4e-11
                   *->kCagCgkpItgdevlralgkvwHpeCFkCskCkkpLgg...tffekd
                       C  C+k ++ +e+l+a+gk +H +CFkC+ C ++L+ +   +  +d
    KIAA1364   626    TCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLsayAYDIED 672  

                   gklyCkdc<-*
                   gk+yCk++   
    KIAA1364   673 GKFYCKPH    680  

//