hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-00181277/chunk_1/iprscan-20080502-00181277.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1347 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00122.10.fs E1-E2 ATPase 344.7 2.7e-104 1 PF00122.10.ls E1-E2 ATPase 346.6 3.7e-101 1 PF00689.11.ls Cation transporting ATPase, C-terminu 195.0 1.6e-55 1 PF00689.11.fs Cation transporting ATPase, C-terminu 193.3 5.4e-55 1 PF00690.16.fs Cation transporter/ATPase, N-terminus 91.4 1.5e-25 1 PF00690.16.ls Cation transporter/ATPase, N-terminus 93.2 7e-25 1 PF00702.16.fs haloacid dehalogenase-like hydrolase 67.2 6.9e-19 2 PF00702.16.ls haloacid dehalogenase-like hydrolase 68.5 2e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00690.16.fs 1/1 21 98 .. 1 87 [] 91.4 1.5e-25 PF00690.16.ls 1/1 21 98 .. 1 87 [] 93.2 7e-25 PF00122.10.ls 1/1 104 339 .. 1 245 [] 346.6 3.7e-101 PF00122.10.fs 1/1 104 339 .. 1 245 [] 344.7 2.7e-104 PF00702.16.ls 1/1 343 664 .. 1 183 [] 68.5 2e-17 PF00702.16.fs 2/2 515 664 .. 51 183 .] 59.7 9.7e-17 PF00689.11.fs 1/1 760 901 .. 1 197 [] 193.3 5.4e-55 PF00689.11.ls 1/1 760 901 .. 1 197 [] 195.0 1.6e-55 Alignments of top-scoring domains: PF00690.16.fs: domain 1 of 1, from 21 to 98: score 91.4, E = 1.5e-25 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe ++k + +l+v ev++ l+ d+++GL+ e+ R++ +G+Ne KIAA1347 21 TSKKAS------ELPVSEVASILQADLQNGLNKCEVSHRRAFHGWNE 61 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* + + ++lw+k+++QFk+pl++lLla+A+iS ++ + KIAA1347 62 FDISEDEPLWKKYISQFKNPLIMLLLASAVIS---VLMHQ 98 PF00690.16.ls: domain 1 of 1, from 21 to 98: score 93.2, E = 7e-25 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe ++k + +l+v ev++ l+ d+++GL+ e+ R++ +G+Ne KIAA1347 21 TSKKAS------ELPVSEVASILQADLQNGLNKCEVSHRRAFHGWNE 61 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* + + ++lw+k+++QFk+pl++lLla+A+iS ++ + KIAA1347 62 FDISEDEPLWKKYISQFKNPLIMLLLASAVIS---VLMHQ 98 PF00122.10.ls: domain 1 of 1, from 104 to 339: score 346.6, E = 3.7e-101 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei i++ +l++ t+ f+qe+r+ek+le+L klvpp+++ +R+G k+e+ KIAA1347 104 SITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREG-KLEHT 149 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs a++LvpGD V +++GdrVPAD+r+ e+++ L++DES+LTGE P +K++ KIAA1347 150 LARDLVPGDTVCLSVGDRVPADLRLFEAVD-LSIDESSLTGETTPCSKVT 198 dvvtp..dnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVe + + ++ + + r n++f+GTlv+ G ++gvV++tG+++++g + k+++ KIAA1347 199 APQPAatNGDlASRSNIAFMGTLVRCGKAKGVVIGTGENSEFGEVFKMMQ 248 eAqssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswle + +ktPlQ+ +d +gk+l+ +++++ ++ ++++l+ g+++le KIAA1347 249 AEEAPKTPLQKSMDLLGKQLSFYSFGIIGIIMLVGWLL------GKDILE 292 gllyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvE +++++v+l+VaA+PegLp+vvtv+lalG+ rm kk a+VK+lp vE KIAA1347 293 ----MFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIVE 338 t<-* t KIAA1347 339 T 339 PF00122.10.fs: domain 1 of 1, from 104 to 339: score 344.7, E = 2.7e-104 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei i++ +l++ t+ f+qe+r+ek+le+L klvpp+++ +R+G k+e+ KIAA1347 104 SITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREG-KLEHT 149 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs a++LvpGD V +++GdrVPAD+r+ e+++ L++DES+LTGE P +K++ KIAA1347 150 LARDLVPGDTVCLSVGDRVPADLRLFEAVD-LSIDESSLTGETTPCSKVT 198 dvvtp..dnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVe + + ++ + + r n++f+GTlv+ G ++gvV++tG+++++g + k+++ KIAA1347 199 APQPAatNGDlASRSNIAFMGTLVRCGKAKGVVIGTGENSEFGEVFKMMQ 248 eAqssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswle + +ktPlQ+ +d +gk+l+ +++++ ++ ++++l+ g+++le KIAA1347 249 AEEAPKTPLQKSMDLLGKQLSFYSFGIIGIIMLVGWLL------GKDILE 292 gllyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvE +++++v+l+VaA+PegLp+vvtv+lalG+ rm kk a+VK+lp vE KIAA1347 293 ----MFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIVE 338 t<-* t KIAA1347 339 T 339 PF00702.16.ls: domain 1 of 1, from 343 to 664: score 68.5, E = 2e-17 *->ikavvFDkDGTLtdgk............................... +++++ Dk+GTLt+ + + ++ ++++ + + ++ + ++ ++ ++ KIAA1347 343 CNVICSDKTGTLTKNEmtvthiftsdglhaevtgvgynqfgevivdg 389 eppiaeaiveaaaelgl.....lpleevekllgrgl.g.....erilleg ++ +++ + + + + ++ + l+g++++g + +++ KIAA1347 390 DVVHGFYNPAVSRIVEAgcvcnDAVIRNNTLMGKPTeGalialAMKMGLD 439 gltaell........................................... gl+ +++++ + + +++ + + +++ ++++ ++ + + KIAA1347 440 GLQQDYIrkaeypfsseqkwmavkcvhrtqqdrpeicfmkgayeqvikyc 489 ............................................d.evlg ++ +++ + + + ++ ++ + ++ + + ++++ ++ +lg KIAA1347 490 ttyqskgqtltltqqqrdvyqqekarmgsaglrvlalasgpelgQlTFLG 539 lial.dklypgarealkaLkrrGikvailTggdr.naealle........ l+ d+++ g++ea+ L + G+ + ++Tg+++++a+a++ + + +++ KIAA1347 540 LVGIiDPPRTGVKEAVTTLIASGVSIKMITGDSQeTAVAIASrlglyskt 589 ..algla.lfdviidsdevggv.gpivvgKPkpeifllalerlgvkpeev ++ ++++d++ + v+ v+ + +p+ + ++++ l+++++ v KIAA1347 590 sqSVS-GeEIDAMDVQQLSQIVpKVAVFYRASPRHKMKIIKSLQKNGSVV 638 gpevlmVGDgvnDapalaaAGvgvamgngg<-* +m GDgvnDa+al+aA++gvamg +g KIAA1347 639 ----AMTGDGVNDAVALKAADIGVAMGQTG 664 PF00702.16.fs: domain 2 of 2, from 515 to 664: score 59.7, E = 9.7e-17 *->illeggltaell.......d.evlglial.dklypgarealkaLkrr +++++gl+ ++l ++++ ++ +lgl+ d+++ g++ea+ L + KIAA1347 515 RMGSAGLRVLALasgpelgQlTFLGLVGIiDPPRTGVKEAVTTLIAS 561 GikvailTggdr.naealle..........algla.lfdviidsdevggv G+ + ++Tg+++++a+a++ + + +++++ ++++d++ + v KIAA1347 562 GVSIKMITGDSQeTAVAIASrlglysktsqSVS-GeEIDAMDVQQLSQIV 610 .gpivvgKPkpeifllalerlgvkpeevgpevlmVGDgvnDapalaaAGv + v+ + +p+ + ++++ l+++++ v +m GDgvnDa+al+aA++ KIAA1347 611 pKVAVFYRASPRHKMKIIKSLQKNGSVV----AMTGDGVNDAVALKAADI 656 gvamgngg<-* gvamg +g KIAA1347 657 GVAMGQTG 664 PF00689.11.fs: domain 1 of 1, from 760 to 901: score 193.3, E = 5.4e-55 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi +pPRn+k ++i+t l++++lv +i++++tl++F+ ++ + KIAA1347 760 KPPRNWK-DSILTKNLILKILVSSIIIVCGTLFVFWRELRDNV---- 801 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv i ++r+tTm+Ft+ KIAA1347 802 ---------------------------------I-----TPRDTTMTFTC 813 lVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsla +V+++mfN al++rs+ ++S+f++g l +N+++++Av +s+ KIAA1347 814 FVFFDMFN---ALSSRSQ-------TKSVFEIG-LCSNRMFCYAVLGSIM 852 lqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRrr +qll++Y+P+lq++Fqt++l s+ ++l++l+++++v i++Ei+K + R+r KIAA1347 853 GQLLVIYFPPLQKVFQTESL-SILDLLFLLGLTSSVCIVAEIIKKVERSR 901 <-* KIAA1347 - - PF00689.11.ls: domain 1 of 1, from 760 to 901: score 195.0, E = 1.6e-55 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi +pPRn+k ++i+t l++++lv +i++++tl++F+ ++ + KIAA1347 760 KPPRNWK-DSILTKNLILKILVSSIIIVCGTLFVFWRELRDNV---- 801 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv i ++r+tTm+Ft+ KIAA1347 802 ---------------------------------I-----TPRDTTMTFTC 813 lVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsla +V+++mfN al++rs+ ++S+f++g l +N+++++Av +s+ KIAA1347 814 FVFFDMFN---ALSSRSQ-------TKSVFEIG-LCSNRMFCYAVLGSIM 852 lqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRrr +qll++Y+P+lq++Fqt++l s+ ++l++l+++++v i++Ei+K + R+r KIAA1347 853 GQLLVIYFPPLQKVFQTESL-SILDLLFLLGLTSSVCIVAEIIKKVERSR 901 <-* KIAA1347 - - //