hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23481030/chunk_1/iprscan-20080501-23481030.nocrc
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Query sequence: KIAA1329
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00602                                                 744.3   3.1e-219   1
SM00089                                                  28.5    0.00092   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00602    1/1       1   528 [.     1   735 []   744.3 3.1e-219
SM00089    1/1     530   620 ..     1    91 []    28.5  0.00092

Alignments of top-scoring domains:
SM00602: domain 1 of 1, from 1 to 528: score 744.3, E = 3.1e-219
                   *->slllgsvkeSsvYiSeDyGkTfkkitdkggltGNrsveviselyisP
                                                                     
    KIAA1329     -    ----------------------------------------------- -    

                   annskvilvtsvsgerksylfissDeGksfqkfklPfppeisPRllpllf
                                                                  l f
    KIAA1329     1 -----------------------------------------------LIF 3    

                   HPknpdyvLayskdncekeilsdkEENSGDEEGqFEiFNiteCrDklYvS
                   HPk++d+vLay+k+   +                           klYvS
    KIAA1329     4 HPKEEDKVLAYTKE---S---------------------------KLYVS 23   

                   dDfGktWeeiqerveyceNSPiSiSDCGFawgvkdsgvsdeptlvyievk
                   +D Gk+W+++qerv++++          ++w+v+  gv+ +p+lv++e++
    KIAA1329    24 SDLGKKWTLLQERVTKDH----------VFWSVS--GVDADPDLVHVEAQ 61   

                   ensgadefSSPYtsteLvssddffqSlrespfviledvygflltdeYlfv
                   +  g  ++      t+ + ++++      +pf +++d  +++++d+Y+f 
    KIAA1329    62 DLGGDFRY-----VTCAIHNCSEKM--LTAPFAGPIDHGSLTVQDDYIFF 104  

                   avtdeeygkDttslklyVSvnrseFamakfPkyhlvkkqdaytIldsded
                   ++t+      ++ +k+yVS++r eF  +k+Pky+l+k   +++I+++de 
    KIAA1329   105 KATS------ANQTKYYVSYRRNEFVLMKLPKYALPK---DLQIISTDES 145  

                   svFvhVsennqdgndDKGitgnLyiSdsrGtkFslsleNvnrytgGGAGs
                   +vFv+V+e+ q   d    t+nLy+Sd rG+++ l+l  v+++++     
    KIAA1329   146 QVFVAVQEWYQ--MD----TYNLYQSDPRGVRYALVLQDVRSSRQ----- 184  

                   DtlvRyfennvyvDFykVeGlkGiyiAnlvsnseeveenkedkklqTvIT
                         +e+ v +D+ +V+G+kG+++An++ +           k+ T+IT
    KIAA1329   185 ------AEESVLIDILEVRGVKGVFLANQKID--G--------KVMTLIT 218  

                   FDkGgdWslLraPesdsngkkfnCdlksednCSLHLhlytsqleNpynsg
                   ++kG+dW++Lr+P+ d+ngk++nC++++   C LHLhl+++  +Npy+sg
    KIAA1329   219 YNKGRDWDYLRPPSMDMNGKPTNCKPPD---CHLHLHLRWA--DNPYVSG 263  

                   mdilSkksApGliiAtGsVGDdsLlsyeepsvFISsDgGetWreifdgpH
                   + +++k++ApGli+++G++G ++L++y +++++I+sD+G+tWr++f+++H
    KIAA1329   264 T-VHTKDTAPGLIMGAGNLG-SQLVEY-KEEMYITSDCGHTWRQVFEEEH 310  

                   lyaylDhGGiiVAiehnsDEDDdptnelkYStDeGkTWktYtFtetpvfv
                   +++ylDhGG+iVAi+++s    +p+++lk+S+DeG TW+t++Ft+t+vfv
    KIAA1329   311 HILYLDHGGVIVAIKDTS----IPLKILKFSVDEGLTWSTHNFTSTSVFV 356  

                   kgllTePgestliftlFGstkereqsswslytvDfkdifNerqCeedDye
                   +gll+ePg++tl++t+FG++++r  s+w+l++vDf++ f  rqC e+Dy+
    KIAA1329   357 DGLLSEPGDETLVMTVFGHISFR--SDWELVKVDFRPSF-SRQCGEEDYS 403  

                   sWelddekWvyspqGskdgCllGkKeiFkRrkptsvClngrsdydlalvs
                   sWel+++      qG  d C++G++++F++rk+ts+C++gr ++++al+s
    KIAA1329   404 SWELSNL------QG--DRCIMGQQRSFRKRKSTSWCIKGR-SFTSALTS 444  

                   saCeKCTreDFECDfgFkrssdGts.levCvpdpelfsanpldppkkcsd
                   ++Ce C+++DF+CD+gF+rs +++s+ ++C+++   f++npl+pp +c +
    KIAA1329   445 RVCE-CRDSDFLCDYGFERSPSSESsTNKCSAN---FWFNPLSPPDDCAL 490  

                   gqeylqstGYRKipgdkCeGGdvkldlegepkkCPgkee<-*
                   gq+y++s GYRK++++ CeGG v+ +++ ++++CP+  +   
    KIAA1329   491 GQTYTSSLGYRKVVSNVCEGG-VDMQQSQVQLQCPLTPP    528  

SM00089: domain 1 of 1, from 530 to 620: score 28.5, E = 0.00092
                   *->vadftasptvgvksiAagesVtFtassStdedGsivsytW..dFGDG
                      +++++ + + + +   +ge+V+F  ++   e G+  + + + d+GDG
    KIAA1329   530    GLQVSIQGEAVAVR--PGEDVLFVVRQ---EQGDVLTTKYqvDLGDG 571  

                   s.....atsstgptvtHtYtkpGtYtVtLtvtnavGnssssatktvvVvv
                    +    ++++tg  + H Y +pG Y V++++ n +G   + a+  v+V  
    KIAA1329   572 FkamyvNLTLTGEPIRHRYESPGIYRVSVRAENTAG--HDEAVLFVQVNS 619  

                   p<-*
                   p   
    KIAA1329   620 P    620  

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