hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23282053/chunk_1/iprscan-20080501-23282053.nocrc
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Query sequence: KIAA1317
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  36.8    2.9e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1      32   137 ..     1   114 []    36.8  2.9e-06

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 32 to 137: score 36.8, E = 2.9e-06
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      + v l+vgg         + +++  H ++ +      + + ++f+ +
    KIAA1317    32    EVVELNVGG---------QVYFT-RHSTLISIP---HSLLWKMFSPk 65   

                   .............ieldDeallievspeaFralLnflYt.kldlpeedve
                   +++ ++  +++++ +++D      ++   Fr +L++l+++++ lp+  + 
    KIAA1317    66 rdtandlakdskgRFFID------RDGFLFRYILDYLRDrQVVLPDH-FP 108  

                   nveelLelAdfldSYGqip.lvelCeefllknl<-*
                   +   l ++A+++    q+p+lv+l +   +k++   
    KIAA1317   109 EKGRLKREAEYF----QLPdLVKLLTPDEIKQS    137  

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