# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh13117.fasta.nr -Q ../query/KIAA1317.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1317, 435 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825969 sequences Expectation_n fit: rho(ln(x))= 5.0219+/-0.000184; mu= 12.1017+/- 0.010 mean_var=76.8201+/-15.418, 0's: 34 Z-trim: 42 B-trim: 2989 in 1/66 Lambda= 0.146331 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74708941|sp|Q68DU8.1|KCD16_HUMAN RecName: Full= ( 428) 2943 630.7 2.1e-178 gi|158258391|dbj|BAF85166.1| unnamed protein produ ( 428) 2932 628.3 1e-177 gi|109079149|ref|XP_001098121.1| PREDICTED: simila ( 428) 2930 627.9 1.4e-177 gi|194219762|ref|XP_001917937.1| PREDICTED: potass ( 428) 2908 623.3 3.5e-176 gi|73949558|ref|XP_544324.2| PREDICTED: similar to ( 428) 2896 620.7 2e-175 gi|114149938|sp|Q5DTY9.2|KCD16_MOUSE RecName: Full ( 427) 2859 612.9 4.5e-173 gi|109506524|ref|XP_225971.4| PREDICTED: similar t ( 427) 2855 612.1 8.1e-173 gi|126290530|ref|XP_001369046.1| PREDICTED: hypoth ( 427) 2820 604.7 1.4e-170 gi|118097646|ref|XP_425217.2| PREDICTED: hypotheti ( 427) 2674 573.9 2.6e-161 gi|190339664|gb|AAI62772.1| Potassium channel tetr ( 423) 2174 468.3 1.5e-129 gi|119582266|gb|EAW61862.1| hCG1979860 [Homo sapie ( 414) 1915 413.6 4.3e-113 gi|67967701|dbj|BAE00333.1| unnamed protein produc ( 318) 1910 412.5 7.4e-113 gi|119895666|ref|XP_606234.3| PREDICTED: similar t ( 314) 1892 408.7 1e-111 gi|47222919|emb|CAF99075.1| unnamed protein produc ( 419) 1829 395.5 1.3e-107 gi|118090562|ref|XP_001233940.1| PREDICTED: hypoth ( 434) 1714 371.2 2.7e-100 gi|47219253|emb|CAG11715.1| unnamed protein produc ( 278) 1576 341.9 1.1e-91 gi|59725633|gb|AAW92110.1| leftover/righton-like 3 ( 280) 1454 316.2 6.4e-84 gi|122937799|gb|ABM68628.1| potassium channel tetr ( 476) 1153 252.8 1.3e-64 gi|74749707|sp|Q6ZWB6.1|KCTD8_HUMAN RecName: Full= ( 473) 1144 250.9 4.7e-64 gi|126331671|ref|XP_001364789.1| PREDICTED: hypoth ( 471) 1143 250.7 5.5e-64 gi|119893833|ref|XP_590048.3| PREDICTED: similar t ( 470) 1142 250.5 6.3e-64 gi|109074127|ref|XP_001099551.1| PREDICTED: simila ( 473) 1140 250.1 8.5e-64 gi|26335653|dbj|BAC31527.1| unnamed protein produc ( 476) 1134 248.8 2.1e-63 gi|81886365|sp|Q50H33.1|KCTD8_MOUSE RecName: Full= ( 476) 1128 247.5 4.9e-63 gi|26335191|dbj|BAC31296.1| unnamed protein produc ( 477) 1128 247.5 5e-63 gi|26337365|dbj|BAC32368.1| unnamed protein produc ( 476) 1113 244.4 4.4e-62 gi|158254037|gb|AAI54160.1| Kctd12.2 protein [Dani ( 282) 1095 240.4 4.2e-61 gi|59725685|gb|AAW92112.1| righton [Danio rerio] ( 271) 1084 238.0 2e-60 gi|126342799|ref|XP_001370941.1| PREDICTED: hypoth ( 273) 1081 237.4 3.2e-60 gi|194209199|ref|XP_001917224.1| PREDICTED: simila ( 315) 1051 231.1 2.9e-58 gi|76676255|ref|XP_605310.2| PREDICTED: similar to ( 183) 1020 224.4 1.8e-56 gi|194385110|dbj|BAG60961.1| unnamed protein produ ( 238) 999 220.0 4.7e-55 gi|148678102|gb|EDL10049.1| mCG51668, isoform CRA_ ( 154) 986 217.1 2.3e-54 gi|148678103|gb|EDL10050.1| mCG51668, isoform CRA_ ( 174) 986 217.2 2.5e-54 gi|148678101|gb|EDL10048.1| mCG51668, isoform CRA_ ( 178) 986 217.2 2.5e-54 gi|149017421|gb|EDL76472.1| rCG49532, isoform CRA_ ( 152) 978 215.4 7.3e-54 gi|149017422|gb|EDL76473.1| rCG49532, isoform CRA_ ( 154) 978 215.4 7.4e-54 gi|194040738|ref|XP_001925952.1| PREDICTED: simila ( 289) 951 210.0 6.1e-52 gi|47230535|emb|CAF99728.1| unnamed protein produc ( 259) 941 207.8 2.4e-51 gi|74200034|dbj|BAC30262.2| unnamed protein produc ( 439) 935 206.8 8.6e-51 gi|59725658|gb|AAW92111.1| dexter [Danio rerio] ( 280) 798 177.7 3.1e-42 gi|59725586|gb|AAW92108.1| leftover/righton-like 1 ( 285) 786 175.1 1.8e-41 gi|190338278|gb|AAI63138.1| Potassium channel tetr ( 285) 782 174.3 3.3e-41 gi|190337518|gb|AAI63117.1| Potassium channel tetr ( 285) 782 174.3 3.3e-41 gi|62202197|gb|AAH92820.1| Potassium channel tetra ( 281) 763 170.3 5.3e-40 gi|59725611|gb|AAW92109.1| leftover/righton-like 2 ( 281) 758 169.2 1.1e-39 gi|12838663|dbj|BAB24283.1| unnamed protein produc ( 111) 706 157.9 1.1e-36 gi|189546380|ref|XP_001921355.1| PREDICTED: simila ( 143) 642 144.5 1.6e-32 gi|26349785|dbj|BAC38532.1| unnamed protein produc ( 346) 642 144.8 3e-32 gi|119613419|gb|EAW93013.1| hCG32906 [Homo sapiens ( 322) 641 144.6 3.3e-32 >>gi|74708941|sp|Q68DU8.1|KCD16_HUMAN RecName: Full=BTB/ (428 aa) initn: 2943 init1: 2943 opt: 2943 Z-score: 3359.3 bits: 630.7 E(): 2.1e-178 Smith-Waterman score: 2943; 100.000% identity (100.000% similar) in 428 aa overlap (8-435:1-428) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|747 RKHPWQSELLRKYHL 420 >>gi|158258391|dbj|BAF85166.1| unnamed protein product [ (428 aa) initn: 2932 init1: 2932 opt: 2932 Z-score: 3346.7 bits: 628.3 E(): 1e-177 Smith-Waterman score: 2932; 99.766% identity (99.766% similar) in 428 aa overlap (8-435:1-428) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|158 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTCQTNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|158 RKHPWQSELLRKYHL 420 >>gi|109079149|ref|XP_001098121.1| PREDICTED: similar to (428 aa) initn: 2930 init1: 2930 opt: 2930 Z-score: 3344.4 bits: 627.9 E(): 1.4e-177 Smith-Waterman score: 2930; 99.299% identity (100.000% similar) in 428 aa overlap (8-435:1-428) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK ::::::::::::::::.::::::::::::::::::::::::::::::::.::: gi|109 MALSGNCSRYYPREQGAAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSFLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPTDRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|109 RKHPWQSELLRKYHL 420 >>gi|194219762|ref|XP_001917937.1| PREDICTED: potassium (428 aa) initn: 2908 init1: 2908 opt: 2908 Z-score: 3319.3 bits: 623.3 E(): 3.5e-176 Smith-Waterman score: 2908; 98.131% identity (99.766% similar) in 428 aa overlap (8-435:1-428) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK ::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|194 MALSGNCSRYYPREQGAAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|194 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QLPDLVKLLTPEEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL ::.:::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CTMGREGQTDAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::.::::::::::::::::::::::::: :::::::: gi|194 ERAFDMLSECGFHMVACNSSVTASFLNQYTDDKIWSSYTEYVFYREPSRWSSSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|194 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSVEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|194 RKHPWQSELLRKYHL 420 >>gi|73949558|ref|XP_544324.2| PREDICTED: similar to pot (428 aa) initn: 2896 init1: 2896 opt: 2896 Z-score: 3305.6 bits: 620.7 E(): 2e-175 Smith-Waterman score: 2896; 97.664% identity (99.533% similar) in 428 aa overlap (8-435:1-428) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK ::::::::::: ::::.:::::::::.:::::::::::::::::::::::::: gi|739 MALSGNCSRYYSREQGAAVPNSFPEVMELNVGGQVYFTRHSTLISIPHSLLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::.:::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|739 MFSPKRDSANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|739 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSVLPADRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CTMGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 ERAFDMLSECGFHMVACNSSVTASFVNQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL :. ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NATGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|739 RKHPWQSELLRKYHL 420 >>gi|114149938|sp|Q5DTY9.2|KCD16_MOUSE RecName: Full=BTB (427 aa) initn: 2044 init1: 2044 opt: 2859 Z-score: 3263.4 bits: 612.9 E(): 4.5e-173 Smith-Waterman score: 2859; 96.262% identity (99.299% similar) in 428 aa overlap (8-435:1-427) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK :::::::::::::.::.:::::::::.:::::::::::::::::::::::::: gi|114 MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|114 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS :::::::::.:...::::::::::::::::::::::::::::::: :::::::::::::: gi|114 QLPDLVKLLAPEDVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::.::::.:::::::::::::::::::: :::::::: gi|114 ERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL :::::: ::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|114 NGKGDK-GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQSNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE ::::::::::::::::::::::::.::::::.:::::::::::::::::::::::::::: gi|114 IQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKLSIEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|114 RKHPWQSELLRKYHL 420 >>gi|109506524|ref|XP_225971.4| PREDICTED: similar to po (427 aa) initn: 2048 init1: 2048 opt: 2855 Z-score: 3258.9 bits: 612.1 E(): 8.1e-173 Smith-Waterman score: 2855; 96.262% identity (99.065% similar) in 428 aa overlap (8-435:1-427) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK :::::::::::::.::.:::::::::.:::::::::::::::::::::::::: gi|109 MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLISIPHSLLWK 10 20 30 40 50 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|109 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEYF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS :::::::::.:.:.::::::::::::::::::::::::::::::: :::::::::::::: gi|109 QLPDLVKLLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHDRKWGFITVGYRGS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL 180 190 200 210 220 230 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK :::::::::::::::::::::::::.::::.:::::::::::::::::::: :::::::: gi|109 ERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVFYREPSRWSSSHCDCCCK 240 250 260 270 280 290 310 320 330 340 350 360 KIAA13 NGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQL :::::: :::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|109 NGKGDK-GESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQGNIQTLDRPIKKGPVQL 300 310 320 330 340 350 370 380 390 400 410 420 KIAA13 IQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPE ::::::::::::::::::::::::.::::::.:::.:::::::::::::::::::::::: gi|109 IQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKVSIEEELEKCIQDFLKIKIPDRFPE 360 370 380 390 400 410 430 KIAA13 RKHPWQSELLRKYHL ::::::::::::::: gi|109 RKHPWQSELLRKYHL 420 >>gi|126290530|ref|XP_001369046.1| PREDICTED: hypothetic (427 aa) initn: 2507 init1: 2507 opt: 2820 Z-score: 3218.9 bits: 604.7 E(): 1.4e-170 Smith-Waterman score: 2820; 95.804% identity (97.902% similar) in 429 aa overlap (8-435:1-427) 10 20 30 40 50 KIAA13 QQQKKGTMALSGNCSRYY-PREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLW ::::::: :: .:::. :::::::::::::::::::::::::.:::::::: gi|126 MALSGNCRSYYLSKEQGT-VPNSFPEVVELNVGGQVYFTRHSTLVSIPHSLLW 10 20 30 40 50 60 70 80 90 100 110 KIAA13 KMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEY ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|126 KMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPERGRLKREAEY 60 70 80 90 100 110 120 130 140 150 160 170 KIAA13 FQLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRG :::::::::::::::::::::.::::::: :::::::::::::::::::::::::::::: gi|126 FQLPDLVKLLTPDEIKQSPDEYCHSDFEDMSQGSDTRICPPSSLLPADRKWGFITVGYRG 120 130 140 150 160 170 180 190 200 210 220 230 KIAA13 SCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKH :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SCTMGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKH 180 190 200 210 220 230 240 250 260 270 280 290 KIAA13 LERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCC ::::::::::::::::::::::::::.::::::::::::::::::::::::: ::::::: gi|126 LERAFDMLSECGFHMVACNSSVTASFVNQYTDDKIWSSYTEYVFYREPSRWSSSHCDCCC 240 250 260 270 280 290 300 310 320 330 340 350 KIAA13 KNGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQ ::::::::::::::::.::::::::::::::::::::::::::: ::::::::::::::: gi|126 KNGKGDKEGESGTSCNELSTSSCDSQSEASSPQETVICGPVTRQPNIQTLDRPIKKGPVQ 300 310 320 330 340 350 360 370 380 390 400 410 KIAA13 LIQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFP ::::::::::::::::::.:::::: :::::::::::::::::::::::::::::::::: gi|126 LIQQSEMRRKSDLLRTLTTGSRESN-SSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFP 360 370 380 390 400 410 420 430 KIAA13 ERKHPWQSELLRKYHL :::::::::::::::: gi|126 ERKHPWQSELLRKYHL 420 >>gi|118097646|ref|XP_425217.2| PREDICTED: hypothetical (427 aa) initn: 2352 init1: 2352 opt: 2674 Z-score: 3052.4 bits: 573.9 E(): 2.6e-161 Smith-Waterman score: 2674; 89.510% identity (96.737% similar) in 429 aa overlap (8-435:1-427) 10 20 30 40 50 KIAA13 QQQKKGTMALSGNCSRYYP-REQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLW ::::::: : : :::::.. .::::::::::::::::::::::.. :::::: gi|118 MALSGNCRTYLPAREQGSGL-QSFPEVVELNVGGQVYFTRHSTLVGTPHSLLW 10 20 30 40 50 60 70 80 90 100 110 KIAA13 KMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEY :::.:::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|118 KMFTPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDKQVVLPDHFPEKGRLKREAEY 60 70 80 90 100 110 120 130 140 150 160 170 KIAA13 FQLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRG :::::::::::::. :::::..::::.:..::::::::::: ::::.::::::::.:::: gi|118 FQLPDLVKLLTPDDSKQSPDDYCHSDYEEVSQGSDTRICPPPSLLPSDRKWGFITIGYRG 120 130 140 150 160 170 180 190 200 210 220 230 KIAA13 SCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKH :::.:::.::::::::::::::::::.:.::::::.:::::::::::::::::::::::: gi|118 SCTIGRESQADAKFRRVPRILVCGRIALVKEVFGESLNESRDPDRAPERYTSRFYLKFKH 180 190 200 210 220 230 240 250 260 270 280 290 KIAA13 LERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCC ::::::::::::::::::::::::::.:::::::.::::::::::::::::. ::::::: gi|118 LERAFDMLSECGFHMVACNSSVTASFVNQYTDDKVWSSYTEYVFYREPSRWASSHCDCCC 240 250 260 270 280 290 300 310 320 330 340 350 KIAA13 KNGKGDKEGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPVQ :.:::.::::::::::.:::::::::::.::::::::::::::: :::::::: ::::: gi|118 KDGKGEKEGESGTSCNELSTSSCDSQSEGSSPQETVICGPVTRQPNIQTLDRPAKKGPVL 300 310 320 330 340 350 360 370 380 390 400 410 KIAA13 LIQQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFP :.:.:: :::::::::::::::::. .::::::::::::::::::::::::::::::::: gi|118 LLQHSESRRKSDLLRTLTSGSREST-ASKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFP 360 370 380 390 400 410 420 430 KIAA13 ERKHPWQSELLRKYHL :::::::::::::::: gi|118 ERKHPWQSELLRKYHL 420 >>gi|190339664|gb|AAI62772.1| Potassium channel tetramer (423 aa) initn: 1987 init1: 1603 opt: 2174 Z-score: 2481.9 bits: 468.3 E(): 1.5e-129 Smith-Waterman score: 2184; 74.134% identity (89.607% similar) in 433 aa overlap (8-435:1-423) 10 20 30 40 50 60 KIAA13 QQQKKGTMALSGNCSRYYPREQGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWK :::::: . :.. .:::.:.:::::::::.::..:::. : ::: : gi|190 MALSGNSK---PKD------SSFPDVIELNVGGQVYYTRYTTLINTPGSLLGK 10 20 30 40 70 80 90 100 110 120 KIAA13 MFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYF .:::: ...::::.: :::.:::::::::::.::::::.::::::::::::::..::::: gi|190 IFSPKNNASNDLARDPKGRYFIDRDGFLFRYVLDYLRDKQVVLPDHFPEKGRLRKEAEYF 50 60 70 80 90 100 130 140 150 160 170 180 KIAA13 QLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGS ::::::::::::..: : ::. :::.::.::::: :.::: ::. :::: ::.::::::: gi|190 QLPDLVKLLTPDDLKPSSDEYIHSDYEDGSQGSDQRMCPPPSLILADRKSGFLTVGYRGS 110 120 130 140 150 160 190 200 210 220 230 240 KIAA13 CTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHL ::.:::...::::::::::..::::.::::::::::::::::::. ..:::::::::::: gi|190 CTMGRENRTDAKFRRVPRIMICGRIALAKEVFGETLNESRDPDRTADKYTSRFYLKFKHL 170 180 190 200 210 220 250 260 270 280 290 300 KIAA13 ERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPSRWSPSHCDCCCK ::.:::::::::.:::::::::::.:::.:::::::::::::::: ::::: :.:::: gi|190 ERSFDMLSECGFQMVACNSSVTASIINQHTDDKIWSSYTEYVFYRGPSRWSSPPCECCCK 230 240 250 260 270 280 310 320 330 340 350 KIAA13 NGKGDKEGE--SGTSCNDLSTSSCDSQSEASSPQETVICGPVTRQTNIQTLDRPIKKGPV . ::. ::: :::: :.::::: .:.::::::: :::::::.:::..:::::: ::::: gi|190 GHKGEAEGEGESGTSFNELSTSSSESHSEASSPQGTVICGPVSRQTHVQTLDRPPKKGPV 290 300 310 320 330 340 360 370 380 390 400 410 KIAA13 QLI---QQSEMRRKSDLLRTLTSGSRESNMSSKKKAVKEKLSIEEELEKCIQDFLKIKIP : . :::: :::::::::::..::... . ::. .:::::.::::::::::: ::::: gi|190 QHLLQQQQSEHRRKSDLLRTLTASSRDTS-TCKKRPAKEKLSVEEELEKCIQDFRKIKIP 350 360 370 380 390 400 420 430 KIAA13 DRFPERKHPWQSELLRKYHL ..:::::. ::..:::::.: gi|190 EHFPERKYMWQADLLRKYRL 410 420 435 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 10:13:41 2009 done: Wed Mar 4 10:18:28 2009 Total Scan time: 1533.160 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]