hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23093060/chunk_1/iprscan-20080501-23093060.nocrc
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Query sequence: KIAA1306
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00454                                                 130.4    1.9e-34   2
SM00326                                                  32.4    6.1e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/1       7    69 ..     1    58 []    32.4  6.1e-05
SM00454    1/2     192   258 ..     1    67 []    68.6  7.7e-16
SM00454    2/2     261   328 ..     1    67 []    61.8  8.8e-14

Alignments of top-scoring domains:
SM00326: domain 1 of 1, from 7 to 69: score 32.4, E = 6.1e-05
                   *->eyvvAlYDyea.qnedELsFkkGDiitvleksddgWweGelnr....
                       +v+A  Dy  + +   L +k+GDiitvle++ dg w+G +++++++
    KIAA1306     7    LQVRATKDYCNnYDLTSLNVKAGDIITVLEQHPDGRWKGCIHDnrtg 53   

                   tGkeGlfPsnYVeeie<-*
                   + ++G+fPs+  e i    
    KIAA1306    54 NDRVGYFPSSLGEAIV    69   

SM00454: domain 1 of 2, from 192 to 258: score 68.6, E = 7.7e-16
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                       ++ s e V++WL + +l+ Ya+nF+++g+d     ++t  edL+ +
    KIAA1306   192    SEgKSSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMT-PEDLTAI 237  

                   GitllGhRkkIlsaiqklkeq<-*
                   G+t++GhRkkI+ +i++l  +   
    KIAA1306   238 GVTKPGHRKKIAAEISGLSIP    258  

SM00454: domain 2 of 2, from 261 to 328: score 61.8, E = 8.8e-14
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                       ++ +p ++a WL  igl+qY + + +ng+   +++  ++ edL+e+
    KIAA1306   261    LPeHKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEI 307  

                   GitllGhRkkIlsaiqklkeq<-*
                   Git+lGh+kk++ a++kl e    
    KIAA1306   308 GITKLGHQKKLMLAVRKLAEL    328  

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