hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23023636/chunk_1/iprscan-20080501-23023636.nocrc
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Query sequence: KIAA1302
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00181                                                  33.5    2.8e-05   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00181    1/2       6    34 ..     1    32 []    15.4      8.2
SM00181    2/2      46    78 ..     1    32 []    18.1      1.2

Alignments of top-scoring domains:
SM00181: domain 1 of 2, from 6 to 34: score 15.4, E = 8.2
                   *->eCa.pCsnGgtEqnGtCisytC.CpgpGytg.rCe<-*
                       C++ C ++     GtC+  +C+C  pG+ g++C    
    KIAA1302     6    ACHpRCAEH-----GTCRDGKCeCS-PGWNGeHCT    34   

SM00181: domain 2 of 2, from 46 to 78: score 18.1, E = 1.2
                   *->eCa.pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-*
                       C + C  +     G+C+ + ++++C C+  G++g  C    
    KIAA1302    46    GCPgLCNGN-----GRCTldlnGWHCvCQ-LGWRGaGCD    78   

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