hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22484835/chunk_1/iprscan-20080501-22484835.nocrc
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Query sequence: KIAA1294
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00295                                                 145.4      6e-39   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00295    1/1      28   233 ..     1   232 []   145.4    6e-39

Alignments of top-scoring domains:
SM00295: domain 1 of 1, from 28 to 233: score 145.4, E = 6e-39
                   *->spkprvlkVylldgttlefevdssttaeelletvcrklglspresey
                        + r++ V+lld+  le+ v+++  a+ell+ v+ +++l  +e+ey
    KIAA1294    28    MTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNL--KEKEY 72   

                   FgLqfedkdedshWldpaktilkqdvkspksepltlyFRvkFyppdwhgp
                   Fg++f+d++++  Wl++++ +l++d    ks+p +lyF v+Fy++     
    KIAA1294    73 FGIAFTDETGHLNWLQLDRRVLEHDFP-KKSGPVVLYFCVRFYIES---- 117  

                   peqlkeDptrynllylQvrddilsGrlpcpseeeallLAaLalqaefGdy
                     +   D+++++l++l +++ i ++ + +   e  ++LA+++lq   Gd+
    KIAA1294   118 -ISYLKDNATIELFFLNAKSCIYKELIDVD-SEVVFELASYILQEAKGDF 165  

                   dpeeeekkkslkhvakelslkrflPkqlldsikasflqiqltlkewrerI
                   +++        ++v+ +l     lP q l+++          l + ++r+
    KIAA1294   166 SSN--------EVVRSDLKKLPALPTQALKEHPS--------LAYCEDRV 199  

                   velhkehaglspeeaklkYLelarrLpptYGvelF<-*
                    e +k++ g+++ +a ++Y+ ++++Lp tYGv+++   
    KIAA1294   200 IEHYKKLNGQTRGQAIVNYMSIVESLP-TYGVHYY    233  

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