hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22434972/chunk_1/iprscan-20080501-22434972.nocrc
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Query sequence: KIAA1291
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08389.2.ls Exportin 1-like protein                        172.5    9.9e-49   1
PF08389.2.fs Exportin 1-like protein                        170.6    3.8e-48   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08389.2.fs   1/1     159   321 ..     1   171 []   170.6  3.8e-48
PF08389.2.ls   1/1     159   321 ..     1   171 []   172.5  9.9e-49

Alignments of top-scoring domains:
PF08389.2.fs: domain 1 of 1, from 159 to 321: score 170.6, E = 3.8e-48
                   *->pkflrnKLalalaelakqewPnnWptffpdlvsllssspsgcellLr
                      +++++  L+++++e++k+ewP++Wp+ + +l  l++++++++el++ 
    KIAA1291   159    ENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMF 205  

                   iLkvLpEEifdqdfsrtpltqdrfnnrlkdllrsqDcmeqilelllqiLe
                   iL++L E+++   f  ++l  +r +++++++l+++  me+i+++ll+ L+
    KIAA1291   206 ILLRLAEDVVT--F--QTLPPQR-RRDIQQTLTQN--MERIFSFLLNTLQ 248  

                   ssqsthss.e.t.q.e.kAkqssellsatLkclgswlslgWipiglianv
                    +++++++ ++++++e+kA++++++ +a+L++l+++++  W+++++i + 
    KIAA1291   249 ENVNKYQQvKtDtSqEsKAQANCRVGVAALNTLAGYID--WVSMSHITA- 295  

                   npi.llnllfslLsgpesdpdlreaAveCL<-*
                   ++++ll++l+ lL    +  +l++ A+eCL   
    KIAA1291   296 ENCkLLEILCLLL----NEQELQLGAAECL    321  

PF08389.2.ls: domain 1 of 1, from 159 to 321: score 172.5, E = 9.9e-49
                   *->pkflrnKLalalaelakqewPnnWptffpdlvsllssspsgcellLr
                      +++++  L+++++e++k+ewP++Wp+ + +l  l++++++++el++ 
    KIAA1291   159    ENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMF 205  

                   iLkvLpEEifdqdfsrtpltqdrfnnrlkdllrsqDcmeqilelllqiLe
                   iL++L E+++   f  ++l  +r +++++++l+++  me+i+++ll+ L+
    KIAA1291   206 ILLRLAEDVVT--F--QTLPPQR-RRDIQQTLTQN--MERIFSFLLNTLQ 248  

                   ssqsthss.e.t.q.e.kAkqssellsatLkclgswlslgWipiglianv
                    +++++++ ++++++e+kA++++++ +a+L++l+++++  W+++++i + 
    KIAA1291   249 ENVNKYQQvKtDtSqEsKAQANCRVGVAALNTLAGYID--WVSMSHITA- 295  

                   npi.llnllfslLsgpesdpdlreaAveCL<-*
                   ++++ll++l+ lL    +  +l++ A+eCL   
    KIAA1291   296 ENCkLLEILCLLL----NEQELQLGAAECL    321  

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