hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22313103/chunk_1/iprscan-20080501-22313103.nocrc
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Query sequence: KIAA1284
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                  26.7     0.0032   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1     194   276 ..     1    80 []    26.7   0.0032

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 194 to 276: score 26.7, E = 0.0032
                   *->gglGfsivg...............gifvssvvpGspAakaGrkslgl
                      + l   i  ++ + ++++++++++ ++v +++pG+ A k+G      
    KIAA1284   194    EVLVGIIHQtkwswrrtgkqgdgeRLVVHGLLPGGSAMKSGQ----- 235  

                   LkvGDvIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-
                   + +GDv+++VN+ ++v   t e + ++l + +g +   +v+Lt +     
    KIAA1284   236 VLIGDVLVAVND-VDV---TTENIERVLSCIPGPM---QVKLTFENAY   276  

                   *
                    
    KIAA1284     -   -    

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