hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22065192/chunk_1/iprscan-20080501-22065192.nocrc
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Query sequence: KIAA1269
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00258                                                 156.4      3e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00258    1/1      91   164 ..     1    76 []   156.4    3e-42

Alignments of top-scoring domains:
SM00258: domain 1 of 1, from 91 to 164: score 156.4, E = 3e-42
                   *->selPvtCGavkGiLykkkFkcPGirvkCIqvedegewlTPkEFeieg
                      +++P+tCG+++++L+++kF+cPGi+vkC+q+++  ++++PkEF++++
    KIAA1269    91    IVYPITCGDSRANLIWRKFVCPGINVKCVQYDE--HVISPKEFVHLA 135  

                   gkgksKDWKrsIRcgGssLRtLmengtLd<-*
                   gk++ KDWKr+IR++G++LR++m++g+Ld   
    KIAA1269   136 GKSTLKDWKRAIRMNGIMLRKIMDSGELD    164  

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