hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22065192/chunk_1/iprscan-20080501-22065192.nocrc
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Query sequence: KIAA1269
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01342.11.fs SAND domain                                    165.7    9.6e-48   1
PF01342.11.ls SAND domain                                    167.6    2.9e-47   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01342.11.fs   1/1      82   164 ..     1    86 []   165.7  9.6e-48
PF01342.11.ls   1/1      82   164 ..     1    86 []   167.6  2.9e-47

Alignments of top-scoring domains:
PF01342.11.fs: domain 1 of 1, from 82 to 164: score 165.7, E = 9.6e-48
                   *->eenvdfkaselPqvTCGevkGiLykkkFksPGisvkCIqyedGkwlT
                      ee+++++a++++++TCG+++++L+++kF++PGi+vkC+qy++ ++++
    KIAA1269    82    EEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDE-HVIS 127  

                   PkeFEiegGkgrsKDWKrsIRcgRSGssLreLmengtld<-*
                   PkeF++++Gk+++KDWKr+IR++  G++Lr++m++g+ld   
    KIAA1269   128 PKEFVHLAGKSTLKDWKRAIRMN--GIMLRKIMDSGELD    164  

PF01342.11.ls: domain 1 of 1, from 82 to 164: score 167.6, E = 2.9e-47
                   *->eenvdfkaselPqvTCGevkGiLykkkFksPGisvkCIqyedGkwlT
                      ee+++++a++++++TCG+++++L+++kF++PGi+vkC+qy++ ++++
    KIAA1269    82    EEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDE-HVIS 127  

                   PkeFEiegGkgrsKDWKrsIRcgRSGssLreLmengtld<-*
                   PkeF++++Gk+++KDWKr+IR++  G++Lr++m++g+ld   
    KIAA1269   128 PKEFVHLAGKSTLKDWKRAIRMN--GIMLRKIMDSGELD    164  

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