hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22001976/chunk_1/iprscan-20080501-22001976.nocrc
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Query sequence: KIAA1265
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02535.12.ls ZIP Zinc transporter                           470.8   1.5e-138   1
PF02535.12.fs ZIP Zinc transporter                           468.8   6.1e-138   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02535.12.fs   1/1     408   823 ..     1   360 []   468.8 6.1e-138
PF02535.12.ls   1/1     408   823 ..     1   360 []   470.8 1.5e-138

Alignments of top-scoring domains:
PF02535.12.fs: domain 1 of 1, from 408 to 823: score 468.8, E = 6.1e-138
                   *->lllkiyaifallitsliglllplliprisklrpesrsskllsfllaF
                       +++i++i++++++sl++ll+++l+p i+      ++++ll+fl+a+
    KIAA1265   408    ASAWICGIISITVISLLSLLGVILVPIINQ----GCFKFLLTFLVAL 450  

                   AaGvlLgtaFlHLLPealealesspclgslhgpwhef...........pf
                   A+G++ g+a+lHLLP++++++++s+++ ++hg++h++++++  ++ + ++
    KIAA1265   451 AVGTMSGDALLHLLPHSQGGHDHSHQHAHGHGHSHGHesnkfleeydaVL 500  

                   aglivllGfflvllleklltllkgr.........................
                   +gl++l+G++l++++e++++++k+ ++++++++   ++++++++ +++ +
    KIAA1265   501 KGLVALGGIYLLFIIEHCIRMFKHYkqqrgkqkwfmkqnteestigrkls 550  

                   ....................gdghshghdhghskehshlvpdees.ake.
                   +++ +++++++  + ++  ++d++++++d+  ++e + l+ ++es++k+ 
    KIAA1265   551 dhklnntpdsdwlqlkplagTDDSVVSEDRLNETELTDLEGQQESpPKNy 600  

                   ......................gnhdeaesaahesdvennhvvhhghheg
                      ++++  +++++++ ++ ++++ ++a++++h++++++   ++h++h++
    KIAA1265   601 lcieeekiidhshsdglhtiheHDLHAAAHNHHGENKTVLRKHNHQWHHK 650  

                   hhhhhhegpekgesdkesglrvadieiilsqflaawllllglilHsffeG
                   h+hh+h+++++g + ke+g++++           aw++++g+++H+f++G
    KIAA1265   651 HSHHSHGPCHSGSDLKETGIANI-----------AWMVIMGDGIHNFSDG 689  

                   LAiGasfssstslgislfiAvlfHklpeglGlgaiLlqagfsrkkavlPW
                   LAiGa+fs++ ++gis++iAv++H+lp++lG++a+Ll+ag+++k+a++  
    KIAA1265   690 LAIGAAFSAGLTGGISTSIAVFCHELPHELGDFAVLLKAGMTVKQAIV-- 737  

                   vlqllfalttpiGiaiGigimrtsydsnspgadivsgiLlafaAGtflYv
                    ++ll+a++++iG++iG+++        + +a++++ +++a++AG+flYv
    KIAA1265   738 -YNLLSAMMAYIGMLIGTAV--------GQYANNITLWIFAVTAGMFLYV 778  

                   alvelLPeelansee..dsgqsslklqllqllalllGfalMalia<-*
                   alv++LPe+l+++  ++++g++++++++lq+l+ll+Gfa+M++ia   
    KIAA1265   779 ALVDMLPEMLHGDGDneEHGFCPVGQFILQNLGLLFGFAIMLVIA    823  

PF02535.12.ls: domain 1 of 1, from 408 to 823: score 470.8, E = 1.5e-138
                   *->lllkiyaifallitsliglllplliprisklrpesrsskllsfllaF
                       +++i++i++++++sl++ll+++l+p i+      ++++ll+fl+a+
    KIAA1265   408    ASAWICGIISITVISLLSLLGVILVPIINQ----GCFKFLLTFLVAL 450  

                   AaGvlLgtaFlHLLPealealesspclgslhgpwhef...........pf
                   A+G++ g+a+lHLLP++++++++s+++ ++hg++h++++++  ++ + ++
    KIAA1265   451 AVGTMSGDALLHLLPHSQGGHDHSHQHAHGHGHSHGHesnkfleeydaVL 500  

                   aglivllGfflvllleklltllkgr.........................
                   +gl++l+G++l++++e++++++k+ ++++++++   ++++++++ +++ +
    KIAA1265   501 KGLVALGGIYLLFIIEHCIRMFKHYkqqrgkqkwfmkqnteestigrkls 550  

                   ....................gdghshghdhghskehshlvpdees.ake.
                   +++ +++++++  + ++  ++d++++++d+  ++e + l+ ++es++k+ 
    KIAA1265   551 dhklnntpdsdwlqlkplagTDDSVVSEDRLNETELTDLEGQQESpPKNy 600  

                   ......................gnhdeaesaahesdvennhvvhhghheg
                      ++++  +++++++ ++ ++++ ++a++++h++++++   ++h++h++
    KIAA1265   601 lcieeekiidhshsdglhtiheHDLHAAAHNHHGENKTVLRKHNHQWHHK 650  

                   hhhhhhegpekgesdkesglrvadieiilsqflaawllllglilHsffeG
                   h+hh+h+++++g + ke+g++++           aw++++g+++H+f++G
    KIAA1265   651 HSHHSHGPCHSGSDLKETGIANI-----------AWMVIMGDGIHNFSDG 689  

                   LAiGasfssstslgislfiAvlfHklpeglGlgaiLlqagfsrkkavlPW
                   LAiGa+fs++ ++gis++iAv++H+lp++lG++a+Ll+ag+++k+a++  
    KIAA1265   690 LAIGAAFSAGLTGGISTSIAVFCHELPHELGDFAVLLKAGMTVKQAIV-- 737  

                   vlqllfalttpiGiaiGigimrtsydsnspgadivsgiLlafaAGtflYv
                    ++ll+a++++iG++iG+++        + +a++++ +++a++AG+flYv
    KIAA1265   738 -YNLLSAMMAYIGMLIGTAV--------GQYANNITLWIFAVTAGMFLYV 778  

                   alvelLPeelansee..dsgqsslklqllqllalllGfalMalia<-*
                   alv++LPe+l+++  ++++g++++++++lq+l+ll+Gfa+M++ia   
    KIAA1265   779 ALVDMLPEMLHGDGDneEHGFCPVGQFILQNLGLLFGFAIMLVIA    823  

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