hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21583615/chunk_1/iprscan-20080501-21583615.nocrc
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Query sequence: KIAA1264
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 316.1    2.5e-90   1
SM00219                                                  73.2    3.2e-17   1
SM00285                                                  58.4    9.4e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00285    1/1      45    80 ..     1    38 []    58.4  9.4e-13
SM00219    1/1     483   734 ..     1   280 []    73.2  3.2e-17
SM00220    1/1     483   734 ..     1   231 []   316.1  2.5e-90

Alignments of top-scoring domains:
SM00285: domain 1 of 1, from 45 to 80: score 58.4, E = 9.4e-13
                   *->IStPtGnFkHiaHVGPfDgatgeFtglptewesllkts<-*
                      IS P+ nF+H++H G fD+++++Ftglp +w sll  +   
    KIAA1264    45    ISGPS-NFEHRVHTG-FDPQEQKFTGLPQQWHSLLADT    80   

SM00219: domain 1 of 1, from 483 to 734: score 73.2, E = 3.2e-17
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda...keeFlrEa
                      l    k+GeG  G+V+ +t k+++ +VAVK++   +++++e + +E 
    KIAA1264   483    LANFIKIGEGSTGIVCIATEKhtgKQVAVKKMDLRKqqrRELLFNEV 529  

                   kiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldyLr
                    iM+ +  +H+N+V ++   + +       + l++vmE+ egG+L d   
    KIAA1264   530 VIMRDY--HHDNVVDMYSSYLVG-------DELWVVMEFLEGGALTDIVT 570  

                   knrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvvKI
                    +r   + ++    +l + +  +YL+ ++++HRD+    +L+++++++K 
    KIAA1264   571 HTR--MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKL 618  

                   sDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdgkFt
                   sDFG +  +  +         +rk+   g+       WmAPE++    + 
    KIAA1264   619 SDFGFCAQVSKE-------VPKRKSL-VGTP-----YWMAPEVISRLPYG 655  

                   skSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRlpkPe
                   ++ D+WS G++  E+  +Ge+PY +      ++ ++++++++   +p+ +
    KIAA1264   656 TEVDIWSLGIMVIEMI-DGEPPYFN-----EPPLQAMRRIRDS-LPPRVK 698  

                   ndlpiSsvtCPdelYd.lMlqCWaedPedRPtFsel..verl<-*
                   +       +  + + ++       ++P++R t +el ++ +l   
    KIAA1264   699 D------LHKVSSVLRgFLDLMLVREPSQRATAQELlgHPFL    734  

SM00220: domain 1 of 1, from 483 to 734: score 316.1, E = 2.5e-90
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.......erilrEi
                           k+G+G+ G V+ a++k+tg++vA+K+++ ++++++e + +E+
    KIAA1264   483    LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDlrkqqrrELLFNEV 529  

                   kiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrrgl
                    i++  +H+N+V +y ++  +d+l++VmE++eG  G L d+  + +    
    KIAA1264   530 VIMRDyHHDNVVDMYSSYLVgDELWVVMEFLEG--GALTDIVTHTR---- 573  

                   rkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvKlaD
                      ++E++++ ++  +l+aL YLH+qg+iHRD+K + iLL+s++++Kl+D
    KIAA1264   574 ---MNEeQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSdgRIKLSD 620  

                   FGlArql.......ttfvGTpeYmAPEvl...gYgkpavDiWSlGcilyE
                   FG+++q++++ ++++++vGTp++mAPEv+++ +Yg+ +vDiWSlG++++E
    KIAA1264   621 FGFCAQVskevpkrKSLVGTPYWMAPEVIsrlPYGT-EVDIWSLGIMVIE 669  

                   lltGkpPFp..qldlifkkig.............SpeakdLikklLvkdP
                   ++ G+pP+ ++ + + +++i+++ +++ ++ ++ S+ ++ +++ +Lv++P
    KIAA1264   670 MIDGEPPYFnePPLQAMRRIRdslpprvkdlhkvSSVLRGFLDLMLVREP 719  

                   ekRlta.eaLedeldikaHPff<-*
                   ++R ta+e+L        HPf+   
    KIAA1264   720 SQRATAqELLG-------HPFL    734  

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