hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-21583615/chunk_1/iprscan-20080501-21583615.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1264 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 294.9 1.4e-85 1 PF00069.15.fs Protein kinase domain 293.0 5.3e-85 1 PF07714.7.fs Protein tyrosine kinase 101.1 3e-29 1 PF07714.7.ls Protein tyrosine kinase 84.9 2.3e-22 1 PF00786.18.fs P21-Rho-binding domain 80.5 3e-22 1 PF00786.18.ls P21-Rho-binding domain 82.4 1.3e-21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00786.18.fs 1/1 44 101 .. 1 60 [] 80.5 3e-22 PF00786.18.ls 1/1 44 101 .. 1 60 [] 82.4 1.3e-21 PF07714.7.fs 1/1 483 691 .. 1 233 [. 101.1 3e-29 PF00069.15.fs 1/1 483 734 .. 1 287 [] 293.0 5.3e-85 PF00069.15.ls 1/1 483 734 .. 1 287 [] 294.9 1.4e-85 PF07714.7.ls 1/1 483 734 .. 1 272 [] 84.9 2.3e-22 Alignments of top-scoring domains: PF00786.18.fs: domain 1 of 1, from 44 to 101: score 80.5, E = 3e-22 *->eIStPLtnFkHvvHVGfDgqtGfftGlPpeWekllkssgiskpeqkk eIS P +nF+H+vH+GfD+q+ +ftGlP++W +ll ++ ++p++++ KIAA1264 44 EISGP-SNFEHRVHTGFDPQEQKFTGLPQQWHSLLADT-ANRPKPMV 88 npqavldvlkfys<-* +p+++++++ ++ KIAA1264 89 DPSCITPIQLAPM 101 PF00786.18.ls: domain 1 of 1, from 44 to 101: score 82.4, E = 1.3e-21 *->eIStPLtnFkHvvHVGfDgqtGfftGlPpeWekllkssgiskpeqkk eIS P +nF+H+vH+GfD+q+ +ftGlP++W +ll ++ ++p++++ KIAA1264 44 EISGP-SNFEHRVHTGFDPQEQKFTGLPQQWHSLLADT-ANRPKPMV 88 npqavldvlkfys<-* +p+++++++ ++ KIAA1264 89 DPSCITPIQLAPM 101 PF07714.7.fs: domain 1 of 1, from 483 to 691: score 101.1, E = 3e-29 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie l k+GeG+ G V+ +t k +t+ +VAVK++ + ++ KIAA1264 483 LANFIKIGEGSTGIVCIATEK----HTGKQVAVKKM---DLRKQQ-- 520 redFlr.EAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd r+++l +E+ iM+ + +H+N+V ++ + g+ l++V+E+ egG KIAA1264 521 RRELLFnEVVIMRDY-HHDNVVDMYSSYLV-GDE----LWVVMEFLEGGA 564 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d + + + +++ +l + ++++YL++++ +HRD+ +L+ KIAA1264 565 LTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL 610 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygkFts ++++ +K sDFG + ++ +++ + k ++ WmAPE+++ + + KIAA1264 611 TSDGRIKLSDFGFCAQV-SKE---VPKRKSLvGTPYWMAPEVISRLPYGT 656 kSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyed<-* + D+WS G++ E++ Ge+P Y + ++ + + ++ +d KIAA1264 657 EVDIWSLGIMVIEMID-GEPP-YFNEPPLQAMRRI-RD 691 PF00069.15.fs: domain 1 of 1, from 483 to 734: score 293.0, E = 5.3e-85 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr + k+G+Gs G V++a++k tgk+VAvK++++rk+ ++ +++ KIAA1264 483 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFN 527 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E+ i++ +H+N+v ++ ++ +d+l++V+E++egG L d+++ KIAA1264 528 --EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG----ALTDIVT- 570 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++++ e+++ ++l +lr+l YLH++g+iHRD+K++ ILl ++g KIAA1264 571 ---HTRM--NEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR 615 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + K++DFG+++++ + ++ +++vGTp++mAPEv+ + +ygt+vD KIAA1264 616 I----KLSDFGFCAQV-SkEVPkRKSLVGTPYWMAPEVIS-RLPYGTEVD 659 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlG++++e++ G+pP+ +e +lq +r+i+ +++ + KIAA1264 660 IWSLGIMVIEMIDGEPPYFNE-----PPLQAMRRIRDSLPPRVKDLH--- 701 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++s+ ++ +++ +L + Ps+R ta+e+l HP++ KIAA1264 702 ---------KVSSVLRGFLDLMLVREPSQRATAQELLGHPFL 734 PF00069.15.ls: domain 1 of 1, from 483 to 734: score 294.9, E = 1.4e-85 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr + k+G+Gs G V++a++k tgk+VAvK++++rk+ ++ +++ KIAA1264 483 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFN 527 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E+ i++ +H+N+v ++ ++ +d+l++V+E++egG L d+++ KIAA1264 528 --EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG----ALTDIVT- 570 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++++ e+++ ++l +lr+l YLH++g+iHRD+K++ ILl ++g KIAA1264 571 ---HTRM--NEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR 615 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + K++DFG+++++ + ++ +++vGTp++mAPEv+ + +ygt+vD KIAA1264 616 I----KLSDFGFCAQV-SkEVPkRKSLVGTPYWMAPEVIS-RLPYGTEVD 659 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlG++++e++ G+pP+ +e +lq +r+i+ +++ + KIAA1264 660 IWSLGIMVIEMIDGEPPYFNE-----PPLQAMRRIRDSLPPRVKDLH--- 701 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++s+ ++ +++ +L + Ps+R ta+e+l HP++ KIAA1264 702 ---------KVSSVLRGFLDLMLVREPSQRATAQELLGHPFL 734 PF07714.7.ls: domain 1 of 1, from 483 to 734: score 84.9, E = 2.3e-22 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie l k+GeG+ G V+ +t k +t+ +VAVK++ + ++ KIAA1264 483 LANFIKIGEGSTGIVCIATEK----HTGKQVAVKKM---DLRKQQ-- 520 redFlr.EAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd r+++l +E+ iM+ + +H+N+V ++ + g+ l++V+E+ egG KIAA1264 521 RRELLFnEVVIMRDY-HHDNVVDMYSSYLV-GDE----LWVVMEFLEGGA 564 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d + + + +++ +l + ++++YL++++ +HRD+ +L+ KIAA1264 565 LTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL 610 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygkFts ++++ +K sDFG + ++ +++ + k ++ WmAPE+++ + + KIAA1264 611 TSDGRIKLSDFGFCAQV-SKE---VPKRKSLvGTPYWMAPEVISRLPYGT 656 kSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCPd + D+WS G++ E++ Ge+P Y + ++ + + ++ +d + KIAA1264 657 EVDIWSLGIMVIEMID-GEPP-YFNEPPLQAMRRI-RDSLPPRVKD--LH 701 elYdlMlqCWa....edPedRPtFsel..veeL<-* ++ ++++ + ++P++R t +el ++ +L KIAA1264 702 KVSSVLRGFLDlmlvREPSQRATAQELlgHPFL 734 //