hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21551513/chunk_1/iprscan-20080501-21551513.nocrc
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Query sequence: KIAA1262
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00150                                                 128.4    7.7e-34   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00150    1/9     129   231 ..     1   104 []    20.9     0.11
SM00150    2/9     238   340 ..     1   104 []    23.3    0.034
SM00150    3/9     347   449 ..     1   104 []     6.9      2.1
SM00150    4/9     456   556 ..     1   104 []    10.0      1.1
SM00150    5/9     669   771 ..     1   104 []     2.9      4.7
SM00150    6/9     778   879 ..     1   104 []    20.9     0.11
SM00150    7/9     886   989 ..     1   104 []    24.3    0.017
SM00150    8/9     996  1101 ..     1   104 []    10.3        1
SM00150    9/9    1210  1305 ..     1   104 []     8.9      1.4

Alignments of top-scoring domains:
SM00150: domain 1 of 9, from 129 to 231: score 20.9, E = 0.11
                   *->qqFlrdadeleaWleeke....qllssedlgeskDlesveallkkHq
                         ++  +el++W ee++++  ++l++ +++     + +++ll  H 
    KIAA1262   129    NVVQSRFQELMEWAEEQQpniaEALKQSPPP-----DMAQNLLMDHL 170  

                   aleaelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLl
                   a+  el+a++  +++l++ +++ +++ g  + + I++ l + +++ + L 
    KIAA1262   171 AICSELEAKQMLLKSLIKDADRVMADLGLNERQVIQKALSDAQSHVNCLS 220  

                   elaeeRrqkLe<-*
                   +l+ +Rr+ L+   
    KIAA1262   221 DLVGQRRKYLN    231  

SM00150: domain 2 of 9, from 238 to 340: score 23.3, E = 0.034
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                       qFl ++ ++ + ++  e++++  e +     +++v ++ k ++  +
    KIAA1262   238    TQFLMAVFQATSQIQQHErKIMFREHIC--LLPDDVSKQVKTCKSAQ 282  

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                   a l++++++v  l ++g++L++e  + ++ e+  +l+el++ ++++l+++
    KIAA1262   283 ASLKTYQNEVTGLWAQGRELMKEVTEQEKSEVLGKLQELQSVYDSVLQKC 332  

                   eeRrqkLe<-*
                     R q Le   
    KIAA1262   333 SHRLQELE    340  

SM00150: domain 3 of 9, from 347 to 449: score 6.9, E = 2.1
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                       +F +d d +  Wl+ +  +     +l   +  +++  +l k q + 
    KIAA1262   347    KHFKEDFDKACHWLKQADiVTFPEINLM--NESTELHTQLAKYQNIL 391  

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                   +   ++e+ + +l+++g+ ++ + ++ d  ++ e+l++l ++++ + +la
    KIAA1262   392 EQSPEYENLLLTLQRTGQTILPSLNEVDHSYLSEKLNALPRQFNVIVALA 441  

                   eeRrqkLe<-*
                   +++  k +   
    KIAA1262   442 KDKFYKVQ    449  

SM00150: domain 4 of 9, from 456 to 556: score 10.0, E = 1.1
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                       ++ + ++ + + l+e e q+l    ++ +  +e++ +l++ + a+ 
    KIAA1262   456    KEYASLIELTTQSLSELEaQFLRMSKVPTDLAVEEALSLQDGCRAIL 502  

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                   +e+a  +e vd+ln+  e + +       +   +++ +l + +++L++++
    KIAA1262   503 DEVAGLGEAVDELNQKKEGFRST----GQPWQPDKMLHLVTLYHRLKRQT 548  

                   eeRrqkLe<-*
                   e+R   Le   
    KIAA1262   549 EQRVSLLE    556  

SM00150: domain 5 of 9, from 669 to 771: score 2.9, E = 4.7
                   *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea
                        F+ ++   ++Wl+  ++ ls   +  +  l+++++ ++k q  ++
    KIAA1262   669    IDFQTEMSRSLDWLRRVKAELSGPVYL-DLNLQDIQEEIRKIQIHQE 714  

                   elaaheervdalne.lgeqLieesghpdaeeIeerleelnerWeeLlela
                   e++     ++al +++ e++ ++ ++  ++++e  l+el e   +++e++
    KIAA1262   715 EVQSSLRIMNALSHkEKEKFTKA-KELISADLEHSLAELSELDGDIQEAL 763  

                   eeRrqkLe<-*
                   + R++ L    
    KIAA1262   764 RTRQATLT    771  

SM00150: domain 6 of 9, from 778 to 879: score 20.9, E = 0.11
                   *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea
                      q++++  + + +Wle+++++l+    g   D+es+e+ lk H ++  
    KIAA1262   778    QRYYQVFQAANDWLEDAQEMLQLAGNG--LDVESAEENLKSHMEFFS 822  

                   elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae
                     ++ +  +++l+ l   L    ++  +e++e++++ l+ r ++  + + 
    KIAA1262   823 TEDQFHSNLEELHSLVATLDPLIKPTGKEDLEQKVASLELRSQRMSRDSG 872  

                   eRrqkLe<-*
                   ++   L+   
    KIAA1262   873 AQVDLLQ    879  

SM00150: domain 7 of 9, from 886 to 989: score 24.3, E = 0.017
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                      + ++++ +e+++ ++++e++l +   l    +  ++e++l +H+al 
    KIAA1262   886    HDYQKAREEVIELMNDTEkKLSEFSLLK-TSSSHEAEEKLSEHKALV 931  

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                     ++  +e++ al+e + qL +  +++ ++++ + ++ + +rW +L++ a
    KIAA1262   932 SVVNSFHEKIVALEEKASQLEKTGNDASKATLSRSMTTVWQRWTRLRAVA 981  

                   eeRrqkLe<-*
                   +++++ Le   
    KIAA1262   982 QDQEKILE    989  

SM00150: domain 8 of 9, from 996 to 1101: score 10.3, E = 1
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                        F+ +++ + + ++  +++l  s       + +++  ll+ H+++ 
    KIAA1262   996    TGFNNKVKKATEMIDQLQdKLPGSSAEK--ASKAELLTLLEYHDTFV 1040 

                   aelaaheervdalnelgeqLiee...sghpdaeeIeerleelnerWeeLl
                    el++++  +  l ++   +++++    + + + + + ++++++r  + +
    KIAA1262  1041 LELEQQQSALGMLRQQTLSMLQDgaaPTPGEEPPLMQEITAMQDRCLNMQ 1090 

                   elaeeRrqkLe<-*
                   e+++  ++  +   
    KIAA1262  1091 EKVKTNGKLVK    1101 

SM00150: domain 9 of 9, from 1210 to 1305: score 8.9, E = 1.4
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                      q++ r ++ l + l+   ++l + +d         v+a+ + ++ l 
    KIAA1262  1210    QELSRQIQKLAKDLTTILtKLKAKTDNV-------VQAKTD-QKVLG 1248 

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                   +el+    ++ +l+++ ++++e+ ++   + + +++ +l e  ++  ++a
    KIAA1262  1249 EELDGCNSKLMELDAAVQKFLEQ-NGQLGKPLAKKIGKLTELHQQTIRQA 1297 

                   eeRrqkLe<-*
                   e+R  kL+   
    KIAA1262  1298 ENRLSKLN    1305 

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