# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh15604.fasta.nr -Q ../query/KIAA1257.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1257, 465 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826717 sequences Expectation_n fit: rho(ln(x))= 5.2994+/-0.000186; mu= 10.9698+/- 0.010 mean_var=78.7748+/-15.095, 0's: 40 Z-trim: 40 B-trim: 0 in 0/67 Lambda= 0.144504 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119599697|gb|EAW79291.1| hCG20001, isoform CRA_ ( 766) 2972 629.2 1.1e-177 gi|109098084|ref|XP_001094939.1| PREDICTED: hypoth ( 510) 2837 601.0 2.3e-169 gi|119599696|gb|EAW79290.1| hCG20001, isoform CRA_ ( 400) 2552 541.5 1.5e-151 gi|194221029|ref|XP_001914892.1| PREDICTED: hypoth ( 405) 1640 351.3 2.5e-94 gi|148666800|gb|EDK99216.1| mCG130866 [Mus musculu ( 406) 1338 288.4 2.3e-75 gi|149255232|ref|XP_001479574.1| PREDICTED: simila (1182) 1287 278.1 8.2e-72 gi|149036663|gb|EDL91281.1| rCG56145 [Rattus norve ( 379) 1062 230.8 4.5e-58 gi|126336528|ref|XP_001378535.1| PREDICTED: hypoth (1022) 614 137.8 1.3e-29 gi|210104021|gb|EEA52049.1| hypothetical protein B (1464) 421 97.6 2.2e-17 gi|189525248|ref|XP_001341613.2| PREDICTED: simila (1083) 414 96.1 4.7e-17 gi|118096818|ref|XP_414316.2| PREDICTED: hypotheti (1077) 405 94.2 1.7e-16 gi|210125144|gb|EEA72837.1| hypothetical protein B (1116) 323 77.1 2.5e-11 gi|198428348|ref|XP_002129280.1| PREDICTED: simila ( 316) 285 68.8 2.3e-09 gi|221117241|ref|XP_002165842.1| PREDICTED: hypoth ( 226) 233 57.8 3.2e-06 gi|221103218|ref|XP_002158223.1| PREDICTED: hypoth ( 140) 216 54.1 2.6e-05 >>gi|119599697|gb|EAW79291.1| hCG20001, isoform CRA_c [H (766 aa) initn: 2972 init1: 2972 opt: 2972 Z-score: 3346.5 bits: 629.2 E(): 1.1e-177 Smith-Waterman score: 2972; 100.000% identity (100.000% similar) in 446 aa overlap (1-446:1-446) 10 20 30 40 50 60 KIAA12 GPAALPAPADAPLSLGVSSPRWLWIRYGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GPAALPAPADAPLSLGVSSPRWLWIRYGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLH 10 20 30 40 50 60 70 80 90 100 110 120 KIAA12 AWEWEEDPASIEPISSITSFYQSTSECDVEEHLKAKARAQESDSDRPCSSIESSSEPAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AWEWEEDPASIEPISSITSFYQSTSECDVEEHLKAKARAQESDSDRPCSSIESSSEPAST 70 80 90 100 110 120 130 140 150 160 170 180 KIAA12 FSSDVPHVVPCKFTISLAFPVNMGQKGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSSDVPHVVPCKFTISLAFPVNMGQKGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLL 130 140 150 160 170 180 190 200 210 220 230 240 KIAA12 PDDEEPKKVDILLFPMVAKVFLESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PDDEEPKKVDILLFPMVAKVFLESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINF 190 200 210 220 230 240 250 260 270 280 290 300 KIAA12 HKITLRLWNTKDKMSRKVRYYRLKTAGFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HKITLRLWNTKDKMSRKVRYYRLKTAGFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNI 250 260 270 280 290 300 310 320 330 340 350 360 KIAA12 VREESNQEHPPGKQEKTEKHPKSLQGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VREESNQEHPPGKQEKTEKHPKSLQGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSR 310 320 330 340 350 360 370 380 390 400 410 420 KIAA12 TPTISLAGASMMEIKELIESESLSSLTNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPTISLAGASMMEIKELIESESLSSLTNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEE 370 380 390 400 410 420 430 440 450 460 KIAA12 ADPTLTGPRKQSAFSIQLAVMPLLAGTHCLPCSQQLLLVLWPERP :::::::::::::::::::::::::: gi|119 ADPTLTGPRKQSAFSIQLAVMPLLAGWQTVVSRGSEKSANILDCLLTLKTEVPIMTEEQK 430 440 450 460 470 480 >>gi|109098084|ref|XP_001094939.1| PREDICTED: hypothetic (510 aa) initn: 2869 init1: 2837 opt: 2837 Z-score: 3196.8 bits: 601.0 E(): 2.3e-169 Smith-Waterman score: 2837; 93.013% identity (96.725% similar) in 458 aa overlap (1-458:44-501) 10 20 30 KIAA12 GPAALPAPADAPLSLGVSSPRWLWIRYGSC :: :::::::::.:::::::::::: ::: gi|109 TTELGERLASALGGDVIKEPLEGNQPQAMAGPPALPAPADAPFSLGVSSPRWLWIWCGSC 20 30 40 50 60 70 40 50 60 70 80 90 KIAA12 RRGPTPRCRPAHPLAGAPAASSALCSMSLHAWEWEEDPASIEPISSITSFYQSTSECDVE :: :::::.::::::::::::.:::::::.:::::::::::::::::::::::::::::: gi|109 RRRPTPRCHPAHPLAGAPAASGALCSMSLNAWEWEEDPASIEPISSITSFYQSTSECDVE 80 90 100 110 120 130 100 110 120 130 140 150 KIAA12 EHLKAKARAQESDSDRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPVNMGQKGKYA :::::::::::::::: ::: ::::: :::::::::::::: :::::::::: :.::::: gi|109 EHLKAKARAQESDSDRQCSSTESSSETASTFSSDVPHVVPCTFTISLAFPVNTGHKGKYA 140 150 160 170 180 190 160 170 180 190 200 210 KIAA12 SLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVFLESGVKTVK ::::::::::::::::.:.:::::::::::::: :::::::::::::::::::::::::: gi|109 SLIEKYKKHPKTDSSVSKLRRFYHIEYFLLPDDGEPKKVDILLFPMVAKVFLESGVKTVK 200 210 220 230 240 250 220 230 240 250 260 270 KIAA12 PWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYYRLKTAGFTD ::::::::::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|109 PWHEGDKAWVSWEQTFNINVTKELLKKINFHKITLRLWNSKDKMSRKVRYYRLKTAGFTD 260 270 280 290 300 310 280 290 300 310 320 330 KIAA12 DVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHPKSLQGSHQA :::::::::::::::::::.:::::::.:::.::::::.:::::::.::::::::::::: gi|109 DVGAFHKSEVRHLVLNQRKFSEQGIENANIVKEESNQEYPPGKQEKVEKHPKSLQGSHQA 320 330 340 350 360 370 340 350 360 370 380 390 KIAA12 EPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESESLSSLTNIL :::.::::::::::: :::::::.:::::::::::::::::::::::::::::::::::: gi|109 EPENSSKNSEEYEKSPKMDDSSTVQWSVSRTPTISLAGASMMEIKELIESESLSSLTNIL 380 390 400 410 420 430 400 410 420 430 440 450 KIAA12 DRQRSQIKGKDSEGRRKIQRRHKKPLAEEEADPTLTGPRKQSAFSIQLAVMPLLAGTHCL :::::::::::::::.::::::::: ::::::::::: :::::::::::::::::::: : gi|109 DRQRSQIKGKDSEGRKKIQRRHKKPPAEEEADPTLTGLRKQSAFSIQLAVMPLLAGTHSL 440 450 460 470 480 490 460 KIAA12 PCSQQLLLVLWPERP :::::: : gi|109 PCSQQLQLARMAISGCS 500 510 >>gi|119599696|gb|EAW79290.1| hCG20001, isoform CRA_b [H (400 aa) initn: 2552 init1: 2552 opt: 2552 Z-score: 2877.2 bits: 541.5 E(): 1.5e-151 Smith-Waterman score: 2552; 100.000% identity (100.000% similar) in 389 aa overlap (57-445:1-389) 30 40 50 60 70 80 KIAA12 YGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLHAWEWEEDPASIEPISSITSFYQSTSE :::::::::::::::::::::::::::::: gi|119 MSLHAWEWEEDPASIEPISSITSFYQSTSE 10 20 30 90 100 110 120 130 140 KIAA12 CDVEEHLKAKARAQESDSDRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPVNMGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CDVEEHLKAKARAQESDSDRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPVNMGQK 40 50 60 70 80 90 150 160 170 180 190 200 KIAA12 GKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVFLESGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVFLESGV 100 110 120 130 140 150 210 220 230 240 250 260 KIAA12 KTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYYRLKTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYYRLKTA 160 170 180 190 200 210 270 280 290 300 310 320 KIAA12 GFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHPKSLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHPKSLQG 220 230 240 250 260 270 330 340 350 360 370 380 KIAA12 SHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESESLSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESESLSSL 280 290 300 310 320 330 390 400 410 420 430 440 KIAA12 TNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEEADPTLTGPRKQSAFSIQLAVMPLLAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEEADPTLTGPRKQSAFSIQLAVMPLLAV 340 350 360 370 380 390 450 460 KIAA12 THCLPCSQQLLLVLWPERP gi|119 RKKKGNSPIS 400 >>gi|194221029|ref|XP_001914892.1| PREDICTED: hypothetic (405 aa) initn: 1502 init1: 936 opt: 1640 Z-score: 1849.6 bits: 351.3 E(): 2.5e-94 Smith-Waterman score: 1640; 62.228% identity (82.324% similar) in 413 aa overlap (57-465:1-405) 30 40 50 60 70 80 KIAA12 YGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLHAWEWE-EDPASIEPISSITSFYQSTS ::::.:::: :: .: :. : ::::. : gi|194 MSLHSWEWEDEDRTSTGPLVSPGSFYQTRS 10 20 30 90 100 110 120 130 140 KIAA12 ECDVEEHLKAKARAQESDSDRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPVNMGQ :::::: ::: ::: ::::. :::.:::. :::. .::::.::::.:.::::::. .:. gi|194 ECDVEECLKA--RAQVSDSDHQCSSVESSDGPASNPNSDVPQVVPCQFVISLAFPARFGH 40 50 60 70 80 150 160 170 180 190 200 KIAA12 KGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVFLESG ::::..:.:::::. : :....: :::::::::::::: :::.:::..:: ::::::.:: gi|194 KGKYTNLMEKYKKQSKMDKGAAKSRRFYHIEYFLLPDDAEPKRVDIVVFPAVAKVFLDSG 90 100 110 120 130 140 210 220 230 240 250 260 KIAA12 VKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYYRLKT ::::.:::::::.:::: :::::..:::::::::::.::::::..:::.:.::::::::. gi|194 VKTVRPWHEGDKVWVSWAQTFNINMTKELLKKINFHQITLRLWDSKDKISKKVRYYRLKA 150 160 170 180 190 200 270 280 290 300 310 320 KIAA12 AGFTDDVGAFHKSE-VRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHPKSL ::...:...: ::: :::::::::.:::::.. ..: .:: ::: ::. : ::: gi|194 AGYSEDAASFGKSEEVRHLVLNQRSLSEQGVH----IEETWSQEFAPGKLEKAGKCLKSL 210 220 230 240 250 260 330 340 350 360 370 380 KIAA12 QGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESESLS .: : . ::. ::.: :: :: .: .:.:::.:: ::. :. :.. :.::::: :.: gi|194 HGFHPGGPESFPKNAEGCEKLLKTEDLATVQWSTSRGPTLPLGVATLTEMKELIERSSFS 270 280 290 300 310 320 390 400 410 420 430 440 KIAA12 SLTNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEEADPTLTGPRKQSAFSIQLAVMPLL :: :::..:. ::: :. :::.: .. :: ::.:..:: .: ::.:::::::.:::: gi|194 SLPNILEKQKVQIKQKEPEGRKKGHKGGKKSQAEDETEPTQAGHWKQDAFSIQLALMPLL 330 340 350 360 370 380 450 460 KIAA12 AGTHCLPCSQQLLLV--LWPERP ::.. ::... : .: : : gi|194 AGSY--TCSSSFWLSRHMWLECP 390 400 >>gi|148666800|gb|EDK99216.1| mCG130866 [Mus musculus] (406 aa) initn: 1148 init1: 561 opt: 1338 Z-score: 1509.3 bits: 288.4 E(): 2.3e-75 Smith-Waterman score: 1338; 55.051% identity (79.293% similar) in 396 aa overlap (54-445:27-406) 30 40 50 60 70 80 KIAA12 WIRYGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLHAWEWE-EDPASIEPISSITSFYQ ::.:::.::.:: :. .:. : .. gi|148 LGGWAFLHWADLLLGSLLSPTRTIRVLCTMSLQAWDWEGEEGSSMGP-------HS 10 20 30 40 90 100 110 120 130 140 KIAA12 STSECDVEEHLKAKARAQESDS-DRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPV .:: ..::.::.. :.. :: :. ::..:: :: .::::..:::.: ::::::: gi|148 VASESEMEENLKSRIPAHDWDSEDQFSSSLHSSEGPACISNSDVPQIVPCRFEISLAFPV 50 60 70 80 90 100 150 160 170 180 190 200 KIAA12 NMGQKGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVF .:.::: .. .: :: ::.. . : :.:::::::.:::: ::: :::..:: ::::: gi|148 LIGNKGKPPNVPDK-KKSAKTETRTGKARQFYHIEYFFLPDDIEPKIVDIVVFPNVAKVF 110 120 130 140 150 160 210 220 230 240 250 260 KIAA12 LESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYY ::::.::::::.. ::.:::: :::...::::::::.::::::::::.:::..:...:: gi|148 LESGTKTVKPWRDDDKVWVSWSQTFHVNVTKELLKKLNFHKITLRLWDTKDRVSKRARYQ 170 180 190 200 210 220 270 280 290 300 310 320 KIAA12 RLKTAGFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHP :.:......:. ... ::.::::...::: .: .:: . :: ..:. :: :::.::: gi|148 RVKASAYSEDLESLE--EVKHLVLSHKKLSLISIGKTNPISEELKEENLPGDQEKSEKHL 230 240 250 260 270 280 330 340 350 360 370 380 KIAA12 KSLQGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESE :: : :::. :::.:: :: :::..: . ..:.:: :::.::.:::::::::. gi|148 KSPQ-----EPEAPSKNDEECEKLLKMEESPLSRRTISKTP-ISLSGATMMEIKELIEKP 290 300 310 320 330 340 390 400 410 420 430 KIAA12 SLSSLTNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEEAD--PTLTGPRKQSAFSIQLA :::::::.:..:.::.::::.: ..: .. :. ::::.: : . ::: ::::: gi|148 SLSSLTNMLEKQKSQLKGKDTEVKKKNPKKVKRYQAEEEGDQKPETPAAWKQSIFSIQLP 350 360 370 380 390 400 440 450 460 KIAA12 VMPLLAGTHCLPCSQQLLLVLWPERP .::::: gi|148 IMPLLA >>gi|149255232|ref|XP_001479574.1| PREDICTED: similar to (1182 aa) initn: 1086 init1: 561 opt: 1287 Z-score: 1445.5 bits: 278.1 E(): 8.2e-72 Smith-Waterman score: 1287; 56.065% identity (80.054% similar) in 371 aa overlap (85-452:8-369) 60 70 80 90 100 110 KIAA12 CSMSLHAWEWEEDPASIEPISSITSFYQSTSECDVEEHLKAKARAQESDS-DRPCSSIES :: ..::.::.. :.. :: :. ::..: gi|149 MGPHSVASESEMEENLKSRIPAHDWDSEDQFSSSLHS 10 20 30 120 130 140 150 160 170 KIAA12 SSEPASTFSSDVPHVVPCKFTISLAFPVNMGQKGKYASLIEKYKKHPKTDSSVTKMRRFY : :: .::::..:::.: ::::::: .:.::: .. .: :: ::.. . : :.:: gi|149 SEGPACISNSDVPQIVPCRFEISLAFPVLIGNKGKPPNVPDK-KKSAKTETRTGKARQFY 40 50 60 70 80 90 180 190 200 210 220 230 KIAA12 HIEYFLLPDDEEPKKVDILLFPMVAKVFLESGVKTVKPWHEGDKAWVSWEQTFNITVTKE :::::.:::: ::: :::..:: :::::::::.::::::.. ::.:::: :::...:::: gi|149 HIEYFFLPDDIEPKIVDIVVFPNVAKVFLESGTKTVKPWRDDDKVWVSWSQTFHVNVTKE 100 110 120 130 140 150 240 250 260 270 280 290 KIAA12 LLKKINFHKITLRLWNTKDKMSRKVRYYRLKTAGFTDDVGAFHKSEVRHLVLNQRKLSEQ ::::.::::::::::.:::..:...:: :.:......:. ... ::.::::...::: gi|149 LLKKLNFHKITLRLWDTKDRVSKRARYQRVKASAYSEDLESLE--EVKHLVLSHKKLSLI 160 170 180 190 200 210 300 310 320 330 340 350 KIAA12 GIENTNIVREESNQEHPPGKQEKTEKHPKSLQGSHQAEPETSSKNSEEYEKSLKMDDSST .: .:: . :: ..:. :: :::.::: :: : :::. :::.:: :: :::..: gi|149 SIGKTNPISEELKEENLPGDQEKSEKHLKSPQ-----EPEAPSKNDEECEKLLKMEESPL 220 230 240 250 260 360 370 380 390 400 410 KIAA12 IQWSVSRTPTISLAGASMMEIKELIESESLSSLTNILDRQRSQIKGKDSEGRRKIQRRHK . ..:.:: :::.::.:::::::::. :::::::.:..:.::.::::.: ..: .. : gi|149 SRRTISKTP-ISLSGATMMEIKELIEKPSLSSLTNMLEKQKSQLKGKDTEVKKKNPKKVK 270 280 290 300 310 320 420 430 440 450 460 KIAA12 KPLAEEEAD--PTLTGPRKQSAFSIQLAVMPLLAGTHCLPCSQQLLLVLWPERP . ::::.: : . ::: ::::: .:::::: . . : gi|149 RYQAEEEGDQKPETPAAWKQSIFSIQLPIMPLLAGWRTVICRGSEKSANILDCFLTLKTE 330 340 350 360 370 380 gi|149 VPIMTEQQKQDLNPLTIKIRCVSCLPIQPVSIHDLERLCSPVYCRYQFHKTPVHETKREP 390 400 410 420 430 440 >>gi|149036663|gb|EDL91281.1| rCG56145 [Rattus norvegicu (379 aa) initn: 1246 init1: 560 opt: 1062 Z-score: 1198.7 bits: 230.8 E(): 4.5e-58 Smith-Waterman score: 1332; 56.266% identity (80.563% similar) in 391 aa overlap (57-445:1-379) 30 40 50 60 70 80 KIAA12 YGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLHAWEWEEDP-ASIEPISSITSFYQSTS :.:.::.:::. :: .:.:. .. :.:.: gi|149 MALQAWDWEEEERASTRPLSTASD-YHSAS 10 20 90 100 110 120 130 140 KIAA12 ECDVEEHLKAKARAQESDSDRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPVNMGQ ::..::. :... ..: ::. ::..:: :: .::::.::::::.:::::: .:. gi|149 ECETEEYPKSRTPGNEWDSEDQFSSLHSSEGPACISNSDVPQVVPCKFVISLAFPSLLGN 30 40 50 60 70 80 150 160 170 180 190 200 KIAA12 KGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVFLESG ::: ... .: :: :... . : :.:::::::.:::: ::: :::..:: ::::::.:: gi|149 KGKPTNVPDK-KKAAKSENRAGKARQFYHIEYFFLPDDIEPKIVDIVVFPNVAKVFLDSG 90 100 110 120 130 140 210 220 230 240 250 260 KIAA12 VKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYYRLKT .::::::.. :: :::: :::....:::::::.:::::::.::.::::.:.::::.:.:: gi|149 IKTVKPWKDDDKFWVSWSQTFHVNMTKELLKKMNFHKITLKLWDTKDKVSKKVRYHRVKT 150 160 170 180 190 200 270 280 290 300 310 320 KIAA12 AGFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHPKSLQ .....: .:. ::..:::.:..:: ..::: :: ..:. :: :::.::: :: : gi|149 SAYSEDSDSFE--EVKNLVLSQKRLSVIVDGKVNIVPEELKEENVPGDQEKAEKHSKSPQ 210 220 230 240 250 260 330 340 350 360 370 380 KIAA12 GSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESESLSS :::: ::: :: :: :::..::. . .. .:: :::.::.:::::::::. :::: gi|149 -----EPETPSKN-EECEKLLKMEESSS-RRTTMKTP-ISLSGATMMEIKELIEKPSLSS 270 280 290 300 310 390 400 410 420 430 440 KIAA12 LTNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEEADPTLTG-PRKQSAFSIQLAVMPLL :::....:.::.:::. : ..: .. :: .::: : : : :::.::::: ::::: gi|149 LTNMVEKQKSQLKGKEIEVKKKNPKKVKKYQTEEERDQRQEGAPWKQSTFSIQLPVMPLL 320 330 340 350 360 370 450 460 KIAA12 AGTHCLPCSQQLLLVLWPERP : gi|149 A >>gi|126336528|ref|XP_001378535.1| PREDICTED: hypothetic (1022 aa) initn: 463 init1: 317 opt: 614 Z-score: 688.1 bits: 137.8 E(): 1.3e-29 Smith-Waterman score: 617; 38.168% identity (70.229% similar) in 262 aa overlap (57-314:1-244) 30 40 50 60 70 80 KIAA12 YGSCRRGPTPRCRPAHPLAGAPAASSALCSMSLHAWEWEEDPASIEPISSITSFYQSTSE :: . :::. . ..: : : ..... gi|126 MSGNPWEWDYEGKQVE--SPIMEQFSTVTL 10 20 90 100 110 120 130 140 KIAA12 CDVEEHLKAKARAQESDSDRPCSSIESSSEPA---STFSSDVPHVVPCKFTISLAFPVNM . :... . .. . :.. :.:.. .: : . .:.:..::: ::: ::.:. gi|126 YQFEDYMPQEEAVEVKRSEH---SVENNIKPYLIHSEYENDIPQIVPCTFTICLALPAVT 30 40 50 60 70 80 150 160 170 180 190 200 KIAA12 GQKGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDDEEPKKVDILLFP-MVAKVFL : ::: . .:.:. . : ..:::::::::: :::::.:::.::..:: ..::::. gi|126 GIKGKISH--DKFKR-IRPDL-LSKMRRFYHIEYQLLPDDREPKQVDVVLFSTVIAKVFM 90 100 110 120 130 140 210 220 230 240 250 260 KIAA12 ESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSRKVRYYR :::.:.:.::.:..: :.::..: .:..:::::::.: :.::. .:..:.:: .:.:. . gi|126 ESGIKSVSPWNENEKLWLSWKETHKISITKELLKKLNHHRITFDIWDAKEKMCKKARFSK 150 160 170 180 190 200 270 280 290 300 310 320 KIAA12 LKTAGFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQEHPPGKQEKTEKHPK .:. . .:: .. :. : ...: . : .:... : :.: gi|126 VKSFSRQEDVHGIGKDARRSPKKKKKKYK---------VSDEDSELPPIGNQSIFFMQLN 210 220 230 240 250 330 340 350 360 370 380 KIAA12 SLQGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELIESES gi|126 LMPLLAVDVPLMTDEQKQDLNPLIIKIKAVTSLPIGPVSPQEIQKSCFPVYCKYKFYNTP 260 270 280 290 300 310 >>gi|210104021|gb|EEA52049.1| hypothetical protein BRAFL (1464 aa) initn: 383 init1: 352 opt: 421 Z-score: 468.5 bits: 97.6 E(): 2.2e-17 Smith-Waterman score: 421; 27.679% identity (60.714% similar) in 336 aa overlap (96-424:82-406) 70 80 90 100 110 120 KIAA12 EDPASIEPISSITSFYQSTSECDVEEHLKAKARAQESDSDRPCSSIESSSE--PASTFSS : . .:. ... . :...: .. .. gi|210 ATAETTLSVEKADSDNGENVTKADNATEQDKEKQDENGTEKGPGESETAGEGDDGTKEAG 60 70 80 90 100 110 130 140 150 160 170 180 KIAA12 DVPHVVPCKFTISLAFPVNMGQKGKYASLIEKYKKHPKTDSSVTKMRRFYHIEYFLLPDD . : : .::..:.:. . ...: :. .. : . ..:.::.::::: gi|210 EESHKVTMTITIAMAIPTVEDEGPTLEEMLQKKKRLLEA----PKAQYYFHLEYYLLPDD 120 130 140 150 160 190 200 210 220 230 240 KIAA12 EEPKKVDILLFPMVAKVFLESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKI ::.:::.. : :.::.. : :.:: : ::. .::.: .. .: :::: : :. :.. gi|210 PEPQKVDLVTFGMAAKIYTEHDSKVVKTWMEGELTWVAWTHNHKIIVTKETLLKLYRHEL 170 180 190 200 210 220 250 260 270 280 290 300 KIAA12 TLRLWNTKDKMSRKVRYYRLKTAGFTDDVGAFHKSEVRHLVLNQRK--LSEQGIENTNIV ::.:..:::.: ..:. : : .: :. . . :. :::.: . .. : ... . . gi|210 KLRIWDSKDKVSPRARFDRPK--AFRLPGGGDELAGVKSLVLKQSQSFMDMQPLKTRQGI 230 240 250 260 270 280 310 320 330 340 350 KIAA12 REESNQEHPPGKQEKTEKHPKSLQGSHQA-EPETSSKNSEEYEKS-LKMDDSSTIQWSVS : : .... .... : .. .:.... . .. .. : : :: : .. . . : gi|210 RSEVSKQRDQYSRNQGEAGQSGKSGQQKSPDKQVPDEASPEKGKSPSKEPQALSPAQGKS 290 300 310 320 330 340 360 370 380 390 400 410 KIAA12 RTPTISLAGASMMEIKELIESESLSSLTNILDRQR-SQIKGKDSEGRRKIQRRHKKPLAE .: . .. . :: :. .: .: .: ::. : . : ... : :: . gi|210 PSPRGKASSPQGKGPPSPIEEEG-ASQEGIRTYDRLSQLAGVSPTG--EVESRGKK--GS 350 360 370 380 390 400 420 430 440 450 460 KIAA12 EEADPTLTGPRKQSAFSIQLAVMPLLAGTHCLPCSQQLLLVLWPERP .::.:. gi|210 KEASPSSYHVPMARRVSEQEIADHGGDHRSNQRMEKEIKKGGPSPVAATSTREPSRQLSE 410 420 430 440 450 460 >>gi|189525248|ref|XP_001341613.2| PREDICTED: similar to (1083 aa) initn: 345 init1: 345 opt: 414 Z-score: 462.4 bits: 96.1 E(): 4.7e-17 Smith-Waterman score: 414; 35.859% identity (69.192% similar) in 198 aa overlap (112-301:33-225) 90 100 110 120 130 140 KIAA12 QSTSECDVEEHLKAKARAQESDSDRPCSSIESSSEPASTFSSDVPHVVPCKFTISLAFPV : :: ..:..: :.: : .:.::. gi|189 RIEDLHLNSALHTEYEVEELNNYDPYIEMPEYSSGDDQSFTTDSSHTVSCTVSIALAIF- 10 20 30 40 50 60 150 160 170 180 190 KIAA12 NMGQKGKYASLIEKYKKHPKTDSS--VTKMRR---FYHIEYFLLPDDEEPKKVDILLFPM : . . :: :: :...: :.. : .: ::: .:::: :: .::...: gi|189 ----KEHEECFTEKRKKGTKNETSNEVVEAPRAEGYYCIEYNMLPDDPEPTRVDLVMFGS 70 80 90 100 110 200 210 220 230 240 250 KIAA12 VAKVFLESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKINFHKITLRLWNTKDKMSR .::... : .:..:::.::...:::: ::... :.:::: :. ::::...:..:.:.: gi|189 AAKLYMASETKVLKPWREGNQVWVSWSQTLKLKVSKELLIKMASHKITVKVWDSKEKLSF 120 130 140 150 160 170 260 270 280 290 300 310 KIAA12 KVRYYRLKTAGFTDDVGAFHKSE---VRHLVLNQRKLSEQGIENTNIVREESNQEHPPGK :.: : :. . .: .. .. ....: ..: ..:..... . : gi|189 KARNDRPKAFRLPQDRSGEDPDQMGGIKKVVCKMRAMNEENLRTRKSVSGISPTKKTLFP 180 190 200 210 220 230 320 330 340 350 360 370 KIAA12 QEKTEKHPKSLQGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMME gi|189 EITEHTEVNLEKEAASLELSFTPLLAGSTMLTDSFGFCSGGVKEGFWNVTLDQQLISEEL 240 250 260 270 280 290 465 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 06:15:13 2009 done: Wed Mar 4 06:19:35 2009 Total Scan time: 1498.410 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]