hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20465578/chunk_1/iprscan-20080501-20465578.nocrc
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Query sequence: KIAA1222
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                  76.8    2.7e-18   1
SM00454                                                  70.3    2.5e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1     156   236 ..     1    80 []    76.8  2.7e-18
SM00454    1/1     629   695 ..     1    67 []    70.3  2.5e-16

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 156 to 236: score 76.8, E = 2.7e-18
                   *->gglGfsivg............gifvssvvpGspAakaGrkslglLkv
                       glG+si g + + + + ++ gifv+ v +G++A ++Gr     ++v
    KIAA1222   156    DGLGISIIGmgvgadagleklGIFVKTVTEGGAAQRDGR-----IQV 197  

                   GDvIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +D+I+eV+G +s+ g+t+  a+ +l++++g      v++++ R++   
    KIAA1222   198 NDQIVEVDG-ISLVGVTQNFAATVLRNTKG-----NVRFVIGREK    236  

SM00454: domain 1 of 1, from 629 to 695: score 70.3, E = 2.5e-16
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                      v +ws+ +V+ WL+s++leqY++ F++++i+ge+ll+l+  + Lk l
    KIAA1222   629    VQeWSVQQVSHWLMSLNLEQYVSEFSAQNITGEQLLQLD-GNKLKAL 674  

                   GitllGhRkkIlsaiqklkeq<-*
                   G+t+ ++R    ++++++k +   
    KIAA1222   675 GMTASQDRAVVKKKLKEMKMS    695  

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