# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh01142.fasta.nr -Q ../query/KIAA1213.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1213, 484 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7821185 sequences Expectation_n fit: rho(ln(x))= 6.6444+/-0.000202; mu= 4.8975+/- 0.011 mean_var=124.9662+/-23.886, 0's: 33 Z-trim: 51 B-trim: 53 in 1/64 Lambda= 0.114730 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|55961904|emb|CAI17012.1| neuron navigator 1 [Ho ( 754) 2932 496.5 9.7e-138 gi|10434134|dbj|BAB14142.1| unnamed protein produc ( 705) 2912 493.2 9.2e-137 gi|55961903|emb|CAI17011.1| neuron navigator 1 [Ho (1483) 2906 492.4 3.2e-136 gi|27526775|emb|CAD32470.1| steerin1 protein [Homo (1836) 2906 492.5 3.8e-136 gi|119611780|gb|EAW91374.1| neuron navigator 1, is (1874) 2906 492.5 3.8e-136 gi|21654877|gb|AAL05591.1| neuron navigator 1 [Hom (1877) 2906 492.5 3.9e-136 gi|147704557|sp|Q8NEY1.2|NAV1_HUMAN RecName: Full= (1877) 2906 492.5 3.9e-136 gi|149058535|gb|EDM09692.1| rCG46036, isoform CRA_ (1718) 2775 470.8 1.2e-129 gi|149058534|gb|EDM09691.1| rCG46036, isoform CRA_ (1805) 2775 470.8 1.3e-129 gi|109498680|ref|XP_001063421.1| PREDICTED: simila (1872) 2775 470.8 1.3e-129 gi|26343333|dbj|BAC35323.1| unnamed protein produc ( 809) 2767 469.2 1.7e-129 gi|26349857|dbj|BAC38568.1| unnamed protein produc ( 827) 2763 468.6 2.8e-129 gi|147704603|sp|Q8CH77.2|NAV1_MOUSE RecName: Full= (1875) 2767 469.5 3.2e-129 gi|37589459|gb|AAH59840.1| Nav1 protein [Mus muscu (1221) 2750 466.6 1.6e-128 gi|73960261|ref|XP_856412.1| PREDICTED: similar to (1838) 2747 466.2 3.2e-128 gi|73960263|ref|XP_856453.1| PREDICTED: similar to (1858) 2747 466.2 3.2e-128 gi|73960259|ref|XP_547359.2| PREDICTED: similar to (1877) 2747 466.2 3.2e-128 gi|73960265|ref|XP_848581.1| PREDICTED: similar to (1880) 2747 466.2 3.2e-128 gi|27436024|gb|AAO13290.1|AF307453_1 neuron naviga (1875) 2741 465.2 6.4e-128 gi|193786352|dbj|BAG51635.1| unnamed protein produ ( 730) 2698 457.8 4.3e-126 gi|119611779|gb|EAW91373.1| neuron navigator 1, is (1487) 2698 458.0 7.5e-126 gi|148707629|gb|EDL39576.1| neuron navigator 1, is (1854) 2373 404.3 1.4e-109 gi|55664896|emb|CAH71925.1| neuron navigator 1 [Ho (1830) 1923 329.8 3.6e-87 gi|194681134|ref|XP_001788927.1| PREDICTED: simila (1540) 1576 272.3 6.2e-70 gi|47208603|emb|CAF94367.1| unnamed protein produc (1449) 1105 194.3 1.7e-46 gi|82079546|sp|Q5TZ18.1|NAV3_DANRE RecName: Full=N (2269) 891 159.1 1.1e-35 gi|119617748|gb|EAW97342.1| neuron navigator 3, is ( 980) 756 136.4 3.1e-29 gi|189520522|ref|XP_001920987.1| PREDICTED: simila (1726) 673 122.9 6.6e-25 gi|189442232|gb|AAI67466.1| LOC733744 protein [Xen (2272) 671 122.7 1e-24 gi|55961905|emb|CAI17013.1| neuron navigator 1 [Ho ( 226) 652 118.7 1.6e-24 gi|148707630|gb|EDL39577.1| neuron navigator 1, is ( 101) 606 110.8 1.7e-22 gi|221042170|dbj|BAH12762.1| unnamed protein produ ( 816) 619 113.7 1.8e-22 gi|119588750|gb|EAW68344.1| neuron navigator 2, is (2395) 619 114.1 4.2e-22 gi|147704669|sp|Q80TN7.2|NAV3_MOUSE RecName: Full= (2359) 580 107.6 3.6e-20 gi|124486648|ref|NP_001074504.1| neuron navigator (2366) 580 107.6 3.6e-20 gi|148689762|gb|EDL21709.1| mCG20172 [Mus musculus (2376) 580 107.6 3.6e-20 gi|149067022|gb|EDM16755.1| rCG48939 [Rattus norve (1616) 577 107.0 3.8e-20 gi|194666776|ref|XP_607306.4| PREDICTED: similar t (2309) 579 107.4 4e-20 gi|194213909|ref|XP_001501882.2| PREDICTED: simila (2428) 579 107.5 4.1e-20 gi|149409546|ref|XP_001505618.1| PREDICTED: simila (2439) 578 107.3 4.7e-20 gi|109480505|ref|XP_235115.4| PREDICTED: similar t (2362) 577 107.1 5.1e-20 gi|109481847|ref|XP_001078354.1| PREDICTED: simila (2363) 577 107.1 5.1e-20 gi|119588752|gb|EAW68346.1| neuron navigator 2, is (1518) 574 106.5 5.1e-20 gi|126339383|ref|XP_001363899.1| PREDICTED: simila (2351) 575 106.8 6.4e-20 gi|109458805|ref|XP_341865.3| PREDICTED: similar t (2425) 575 106.8 6.6e-20 gi|114636547|ref|XP_508328.2| PREDICTED: neuron na (2359) 574 106.6 7.2e-20 gi|194226603|ref|XP_001489298.2| PREDICTED: neuron (2361) 574 106.6 7.2e-20 gi|21396506|dbj|BAC00853.1| helicase [Homo sapiens (2365) 574 106.6 7.2e-20 gi|161169015|ref|NP_001104488.1| neuron navigator (2365) 574 106.6 7.2e-20 gi|38044282|ref|NP_660093.2| neuron navigator 2 is (2429) 574 106.6 7.4e-20 >>gi|55961904|emb|CAI17012.1| neuron navigator 1 [Homo s (754 aa) initn: 2921 init1: 2921 opt: 2932 Z-score: 2629.1 bits: 496.5 E(): 9.7e-138 Smith-Waterman score: 2932; 96.667% identity (98.125% similar) in 480 aa overlap (1-480:264-737) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|559 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 240 250 260 270 280 290 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 300 310 320 330 340 350 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 360 370 380 390 400 410 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 420 430 440 450 460 470 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 480 490 500 510 520 530 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 540 550 560 570 580 590 340 350 360 370 380 390 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSQIRKLRRELESSQEKVATLTSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSQIRKLRRELESSQEKVATLTSQL 600 610 620 630 640 650 400 410 420 430 440 450 KIAA12 SANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGAL 660 670 680 690 700 710 460 470 480 KIAA12 NASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::: .:: .:.. : ::... gi|559 NASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADA 720 730 740 750 >>gi|10434134|dbj|BAB14142.1| unnamed protein product [H (705 aa) initn: 2901 init1: 2901 opt: 2912 Z-score: 2611.6 bits: 493.2 E(): 9.2e-137 Smith-Waterman score: 2912; 96.042% identity (97.708% similar) in 480 aa overlap (1-480:215-688) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|104 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 190 200 210 220 230 240 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 250 260 270 280 290 300 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 310 320 330 340 350 360 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 370 380 390 400 410 420 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|104 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHPHTIGGLPESDDQ 430 440 450 460 470 480 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 490 500 510 520 530 540 340 350 360 370 380 390 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSQIRKLRRELESSQEKVATLTSQL ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|104 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSQIRKLRRELELSQEKVATLTSQL 550 560 570 580 590 600 400 410 420 430 440 450 KIAA12 SANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGAL ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 SANASLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGAL 610 620 630 640 650 660 460 470 480 KIAA12 NASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::: .:: .:.. : ::... gi|104 NASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADA 670 680 690 700 >>gi|55961903|emb|CAI17011.1| neuron navigator 1 [Homo s (1483 aa) initn: 2391 init1: 2391 opt: 2906 Z-score: 2601.8 bits: 492.4 E(): 3.2e-136 Smith-Waterman score: 2906; 95.082% identity (96.516% similar) in 488 aa overlap (1-480:316-797) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|559 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 290 300 310 320 330 340 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 350 360 370 380 390 400 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 410 420 430 440 450 460 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 470 480 490 500 510 520 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 530 540 550 560 570 580 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 590 600 610 620 630 640 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|559 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 650 660 670 680 690 700 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 710 720 730 740 750 760 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::::::::::: .:: .:.. : ::... gi|559 QAVIQGALNASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 770 780 790 800 810 gi|559 KSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSTS 820 830 840 850 860 870 >>gi|27526775|emb|CAD32470.1| steerin1 protein [Homo sap (1836 aa) initn: 2391 init1: 2391 opt: 2906 Z-score: 2600.5 bits: 492.5 E(): 3.8e-136 Smith-Waterman score: 2906; 95.082% identity (96.516% similar) in 488 aa overlap (1-480:666-1147) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|275 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 640 650 660 670 680 690 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|275 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 700 710 720 730 740 750 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|275 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 760 770 780 790 800 810 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|275 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 820 830 840 850 860 870 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|275 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 880 890 900 910 920 930 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|275 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 940 950 960 970 980 990 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|275 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 1000 1010 1020 1030 1040 1050 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|275 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1060 1070 1080 1090 1100 1110 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::::::::::: .:: .:.. : ::... gi|275 QAVIQGALNASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1120 1130 1140 1150 1160 gi|275 KSWVYELRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKS 1170 1180 1190 1200 1210 1220 >>gi|119611780|gb|EAW91374.1| neuron navigator 1, isofor (1874 aa) initn: 2391 init1: 2391 opt: 2906 Z-score: 2600.4 bits: 492.5 E(): 3.8e-136 Smith-Waterman score: 2906; 95.082% identity (96.516% similar) in 488 aa overlap (1-480:707-1188) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|119 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 680 690 700 710 720 730 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 740 750 760 770 780 790 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 800 810 820 830 840 850 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 860 870 880 890 900 910 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 920 930 940 950 960 970 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 980 990 1000 1010 1020 1030 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|119 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1100 1110 1120 1130 1140 1150 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::::::::::: .:: .:.. : ::... gi|119 QAVIQGALNASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1160 1170 1180 1190 1200 1210 gi|119 KSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSTS 1220 1230 1240 1250 1260 1270 >>gi|21654877|gb|AAL05591.1| neuron navigator 1 [Homo sa (1877 aa) initn: 2391 init1: 2391 opt: 2906 Z-score: 2600.4 bits: 492.5 E(): 3.9e-136 Smith-Waterman score: 2906; 95.082% identity (96.516% similar) in 488 aa overlap (1-480:707-1188) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|216 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 680 690 700 710 720 730 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 740 750 760 770 780 790 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 800 810 820 830 840 850 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 860 870 880 890 900 910 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 920 930 940 950 960 970 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 980 990 1000 1010 1020 1030 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|216 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|216 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1100 1110 1120 1130 1140 1150 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::::::::::: .:: .:.. : ::... gi|216 QAVIQGALNASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1160 1170 1180 1190 1200 1210 gi|216 KSWVYELRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKS 1220 1230 1240 1250 1260 1270 >>gi|147704557|sp|Q8NEY1.2|NAV1_HUMAN RecName: Full=Neur (1877 aa) initn: 2391 init1: 2391 opt: 2906 Z-score: 2600.4 bits: 492.5 E(): 3.9e-136 Smith-Waterman score: 2906; 95.082% identity (96.516% similar) in 488 aa overlap (1-480:707-1188) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR :::::::::::::::::::::::::::::: gi|147 AKSSSMSVTGGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPTKVASGRTTPAPVNQTDR 680 690 700 710 720 730 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP 740 750 760 770 780 790 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF 800 810 820 830 840 850 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE 860 870 880 890 900 910 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 920 930 940 950 960 970 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 980 990 1000 1010 1020 1030 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|147 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1100 1110 1120 1130 1140 1150 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP :::::::::::::::: .:: .:.. : ::... gi|147 QAVIQGALNASETTPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1160 1170 1180 1190 1200 1210 gi|147 KSWVYELRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKS 1220 1230 1240 1250 1260 1270 >>gi|149058535|gb|EDM09692.1| rCG46036, isoform CRA_b [R (1718 aa) initn: 1724 init1: 1052 opt: 2775 Z-score: 2483.7 bits: 470.8 E(): 1.2e-129 Smith-Waterman score: 2775; 90.984% identity (95.082% similar) in 488 aa overlap (1-480:642-1119) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR ::::::::::::.::::::.:::::::::: gi|149 PAKSSSMSVTGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPSKVASGRSTPAPVNQTDR 620 630 640 650 660 670 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|149 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPPATKLAELPPTPLRATAKSFVKPP 680 690 700 710 720 730 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :.::::::::::::::::::: :::::::::::::..:.::::::::::::::::::::: gi|149 SIANLDKVNSNSLDLPSSSDT-HASKVPDLHATSSSTGSPLPSCFTPSPAPILNINSASF 740 750 760 770 780 790 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE ::::::::::::::::::::::::::::::::::::::::::::..:.::::. ::.: gi|149 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSTAPIPTPPT---APSE 800 810 820 830 840 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EETEELPWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 850 860 870 880 890 900 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL .:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AELPSPPALSMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 910 920 930 940 950 960 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|149 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 970 980 990 1000 1010 1020 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1030 1040 1050 1060 1070 1080 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP ::::::::::::.::: .:: .:.. : ::... gi|149 QAVIQGALNASEATPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1090 1100 1110 1120 1130 1140 gi|149 KSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSNS 1150 1160 1170 1180 1190 1200 >>gi|149058534|gb|EDM09691.1| rCG46036, isoform CRA_a [R (1805 aa) initn: 1724 init1: 1052 opt: 2775 Z-score: 2483.4 bits: 470.8 E(): 1.3e-129 Smith-Waterman score: 2775; 90.984% identity (95.082% similar) in 488 aa overlap (1-480:642-1119) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR ::::::::::::.::::::.:::::::::: gi|149 PAKSSSMSVTGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPSKVASGRSTPAPVNQTDR 620 630 640 650 660 670 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|149 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPPATKLAELPPTPLRATAKSFVKPP 680 690 700 710 720 730 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :.::::::::::::::::::: :::::::::::::..:.::::::::::::::::::::: gi|149 SIANLDKVNSNSLDLPSSSDT-HASKVPDLHATSSSTGSPLPSCFTPSPAPILNINSASF 740 750 760 770 780 790 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE ::::::::::::::::::::::::::::::::::::::::::::..:.::::. ::.: gi|149 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSTAPIPTPPT---APSE 800 810 820 830 840 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EETEELPWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 850 860 870 880 890 900 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL .:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AELPSPPALSMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 910 920 930 940 950 960 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|149 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 970 980 990 1000 1010 1020 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1030 1040 1050 1060 1070 1080 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP ::::::::::::.::: .:: .:.. : ::... gi|149 QAVIQGALNASEATPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1090 1100 1110 1120 1130 1140 gi|149 KSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSNS 1150 1160 1170 1180 1190 1200 >>gi|109498680|ref|XP_001063421.1| PREDICTED: similar to (1872 aa) initn: 1724 init1: 1052 opt: 2775 Z-score: 2483.2 bits: 470.8 E(): 1.3e-129 Smith-Waterman score: 2775; 90.984% identity (95.082% similar) in 488 aa overlap (1-480:709-1186) 10 20 30 KIAA12 QGGLTPSRLKEPTKVASGRTTPAPVNQTDR ::::::::::::.::::::.:::::::::: gi|109 PAKSSSMSVTGRGGPRPVSSSIDPSLLSTKQGGLTPSRLKEPSKVASGRSTPAPVNQTDR 680 690 700 710 720 730 40 50 60 70 80 90 KIAA12 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPP :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|109 EKEKAKAKAVALDSDNISLKSIGSPESTPKNQASHPPATKLAELPPTPLRATAKSFVKPP 740 750 760 770 780 790 100 110 120 130 140 150 KIAA12 SLANLDKVNSNSLDLPSSSDTTHASKVPDLHATSSASGGPLPSCFTPSPAPILNINSASF :.::::::::::::::::::: :::::::::::::..:.::::::::::::::::::::: gi|109 SIANLDKVNSNSLDLPSSSDT-HASKVPDLHATSSSTGSPLPSCFTPSPAPILNINSASF 800 810 820 830 840 850 160 170 180 190 200 210 KIAA12 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSSTPVPTPPAPPAAPTE ::::::::::::::::::::::::::::::::::::::::::::..:.::::. ::.: gi|109 SQGLELMSGFSVPKETRMYPKLSGLHRSMESLQMPMSLPSAFPSTAPIPTPPT---APSE 860 870 880 890 900 910 220 230 240 250 260 270 KIAA12 EETEELTWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EETEELPWSGSPRAGQLDSNQRDRNTLPKKGLRYQLQSQEETKERRHSHTIGGLPESDDQ 920 930 940 950 960 970 280 290 300 310 320 330 KIAA12 SELPSPPALPMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL .:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AELPSPPALSMSLSAKGQLTNIVSPTAATTPRITRSNSIPTHEAAFELYSGSQMGSTLSL 980 990 1000 1010 1020 1030 340 350 360 370 380 KIAA12 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSS--------QIRKLRRELESSQEK ::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|109 AERPKGMIRSGSFRDPTDDVHGSVLSLASSASSTYSSAEERMQSEQIRKLRRELESSQEK 1040 1050 1060 1070 1080 1090 390 400 410 420 430 440 KIAA12 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VATLTSQLSANANLVAAFEQSLVNMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEA 1100 1110 1120 1130 1140 1150 450 460 470 480 KIAA12 QAVIQGALNASETTPKGRTSSHRLRGNREQESKSITDFYLGP ::::::::::::.::: .:: .:.. : ::... gi|109 QAVIQGALNASEATPK------ELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKK 1160 1170 1180 1190 1200 gi|109 KSWLRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSNS 1210 1220 1230 1240 1250 1260 484 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 03:20:07 2009 done: Wed Mar 4 03:24:18 2009 Total Scan time: 1508.680 Total Display time: 0.290 Function used was FASTA [version 34.26.5 April 26, 2007]