hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20114925/chunk_1/iprscan-20080501-20114925.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1202
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                  57.3      2e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1      23    96 ..     1    80 []    57.3    2e-12

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 23 to 96: score 57.3, E = 2e-12
                   *->gglGfsivg......gifvssvvpGspAakaGrkslglLkvGDvIle
                      +++Gf+++g+ ++ +++ vs++++G+ Aa + +     ++ GD+++ 
    KIAA1202    23    APWGFTLKGglehcePLTVSKIEDGGKAALSQK-----MRTGDELVN 64   

                   VNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +NG t++ g   +ea++l+k++ +      ++L+v+R++   
    KIAA1202    65 ING-TPLYGS-RQEALILIKGSFR-----ILKLIVRRRN    96   

//