hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20034327/chunk_1/iprscan-20080501-20034327.nocrc
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Query sequence: KIAA1197
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03366.6.ls YEATS family                                   147.8    2.7e-41   1
PF03366.6.fs YEATS family                                   145.8    1.1e-40   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03366.6.fs   1/1     296   380 ..     1    87 []   145.8  1.1e-40
PF03366.6.ls   1/1     296   380 ..     1    87 []   147.8  2.7e-41

Alignments of top-scoring domains:
PF03366.6.fs: domain 1 of 1, from 296 to 380: score 145.8, E = 1.1e-40
                   *->THkWtvyVrgldgedkEpiskfVkKVtFkLHeSFanpkRvvt.ePPF
                      THkW+vyVrg  +e   +i++fVkKV+F LH+S+++++ v+++ePPF
    KIAA1197   296    THKWMVYVRGSRREP--SINHFVKKVWFFLHPSYKPNDLVEVrEPPF 340  

                   eitEtGWGEFeirIkiffrndsnekkvsisHdLvLdqddyt<-*
                   ++t++GWGEF++r++++f+ ds++k+++i+H+L+Ld +  +   
    KIAA1197   341 HLTRRGWGEFPVRVQVHFK-DSQNKRIDIIHNLKLDRTYTG    380  

PF03366.6.ls: domain 1 of 1, from 296 to 380: score 147.8, E = 2.7e-41
                   *->THkWtvyVrgldgedkEpiskfVkKVtFkLHeSFanpkRvvt.ePPF
                      THkW+vyVrg  +e   +i++fVkKV+F LH+S+++++ v+++ePPF
    KIAA1197   296    THKWMVYVRGSRREP--SINHFVKKVWFFLHPSYKPNDLVEVrEPPF 340  

                   eitEtGWGEFeirIkiffrndsnekkvsisHdLvLdqddyt<-*
                   ++t++GWGEF++r++++f+ ds++k+++i+H+L+Ld +  +   
    KIAA1197   341 HLTRRGWGEFPVRVQVHFK-DSQNKRIDIIHNLKLDRTYTG    380  

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