hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20020028/chunk_1/iprscan-20080501-20020028.nocrc
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Query sequence: KIAA1196
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 113.3    2.8e-29   6

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/6      64    86 ..     1    23 []     5.9       68
SM00355      2/6      99   122 ..     1    23 []    26.2   0.0045
SM00355      3/6     499   522 ..     1    23 []    23.3    0.034
SM00355      4/6     553   575 ..     1    23 []    10.9       19
SM00355      5/6     589   612 ..     1    23 []    22.7    0.053
SM00355      6/6     743   766 ..     1    23 []    24.3    0.017

Alignments of top-scoring domains:
SM00355: domain 1 of 6, from 64 to 86: score 5.9, E = 68
                   *->ykCpi.gCgksfssk.aLkrHmrvH<-*
                       kCp +gC   f+s   Lk H++     
    KIAA1196    64    VKCPNsGCWLEFPSIyGLKYHYQ--    86   

SM00355: domain 2 of 6, from 99 to 122: score 26.2, E = 0.0045
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + Cp+ C   f+sk++L++H    H   
    KIAA1196    99    FPCPF-CEAAFTSKtQLEKHRIwNH    122  

SM00355: domain 3 of 6, from 499 to 522: score 23.3, E = 0.034
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      +kC++ C k+f+sk  L+ H +  H   
    KIAA1196   499    LKCQH-CRKQFKSKaGLNYHTMaEH    522  

SM00355: domain 4 of 6, from 553 to 575: score 10.9, E = 19
                   *->ykCpi.gCgksfssk.aLkrHmrvH<-*
                      ++Cp++gCg  fss   ++ H+r     
    KIAA1196   553    LRCPQeGCGAAFSSLmGYQYHQR--    575  

SM00355: domain 5 of 6, from 589 to 612: score 22.7, E = 0.053
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + C++ Cgk+++sk     H+r+ H   
    KIAA1196   589    FPCTH-CGKTYRSKaGHDYHVRsEH    612  

SM00355: domain 6 of 6, from 743 to 766: score 24.3, E = 0.017
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y+C + C+k fss++  k H+ ++H   
    KIAA1196   743    YRCLL-CPKEFSSEsGVKYHILkTH    766  

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