hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20020028/chunk_1/iprscan-20080501-20020028.nocrc
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Query sequence: KIAA1196
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                         122.2    1.3e-33   8
PF00096.16.fs Zinc finger, C2H2 type                         106.4    7.8e-29   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.fs   2/8      99   122 ..     1    24 []    23.0  0.00017
PF00096.16.ls   2/8      99   122 ..     1    24 []    25.0  0.00025
PF00096.16.ls   4/8     499   522 ..     1    24 []    20.9   0.0041
PF00096.16.ls   6/8     589   612 ..     1    24 []    18.1    0.031
PF00096.16.ls   8/8     743   766 ..     1    24 []    22.3   0.0016

Alignments of top-scoring domains:
PF00096.16.fs: domain 2 of 8, from 99 to 122: score 23.0, E = 0.00017
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      + Cp  C  +F++k +L++H+  +H   
    KIAA1196    99    FPCP-FCEAAFTSKTQLEKHRIWnH    122  

PF00096.16.ls: domain 2 of 8, from 99 to 122: score 25.0, E = 0.00025
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      + Cp  C  +F++k +L++H+  +H   
    KIAA1196    99    FPCP-FCEAAFTSKTQLEKHRIWnH    122  

PF00096.16.ls: domain 4 of 8, from 499 to 522: score 20.9, E = 0.0041
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                       kC+ +C k F++k+ L+ H + +H   
    KIAA1196   499    LKCQ-HCRKQFKSKAGLNYHTMAeH    522  

PF00096.16.ls: domain 6 of 8, from 589 to 612: score 18.1, E = 0.031
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      + C+ +Cgk++++k+    H r++H   
    KIAA1196   589    FPCT-HCGKTYRSKAGHDYHVRSeH    612  

PF00096.16.ls: domain 8 of 8, from 743 to 766: score 22.3, E = 0.0016
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      y+C   C k Fs+ s  k H+ ++H   
    KIAA1196   743    YRCL-LCPKEFSSESGVKYHILKtH    766  

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