hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19584648/chunk_1/iprscan-20080501-19584648.nocrc
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Query sequence: KIAA1194
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00369                                                  62.7    4.6e-14   3

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/3      68    90 ..     1    24 []    18.9     0.73
SM00369     2/3      91   113 ..     1    24 []    22.1    0.077
SM00369     3/3     114   137 ..     1    24 []    21.7      0.1

Alignments of top-scoring domains:
SM00369: domain 1 of 3, from 68 to 90: score 18.9, E = 0.73
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L++L+ L+Ls+N L+++P+++ +    
    KIAA1194    68    LTHLTALHLSDNSLSRIPSDI-AK    90   

SM00369: domain 2 of 3, from 91 to 113: score 22.1, E = 0.077
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+nL  LdLs+N+++sLP+++ ++   
    KIAA1194    91    LHNLVYLDLSSNKIRSLPAEL-GN    113  

SM00369: domain 3 of 3, from 114 to 137: score 21.7, E = 0.1
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      +++LreL+L+nN L+ LP ++      
    KIAA1194   114    MVSLRELHLNNNLLRVLPFELGKL    137  

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