# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg03443a.fasta.nr -Q ../query/KIAA1190.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1190, 174 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7791759 sequences Expectation_n fit: rho(ln(x))= 5.9700+/-0.000205; mu= 4.3590+/- 0.011 mean_var=126.9732+/-23.718, 0's: 30 Z-trim: 200 B-trim: 0 in 0/65 Lambda= 0.113820 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74761930|sp|Q9UFB7.2|ZBT47_HUMAN RecName: Full= ( 371) 1310 225.4 7.1e-57 gi|34533807|dbj|BAC86810.1| unnamed protein produc ( 645) 1310 225.7 1e-56 gi|168273192|dbj|BAG10435.1| zinc finger and BTB d ( 650) 1310 225.7 1e-56 gi|67970176|dbj|BAE01432.1| unnamed protein produc ( 293) 1272 219.1 4.5e-55 gi|73990353|ref|XP_851976.1| PREDICTED: similar to (2045) 1105 192.5 3.1e-46 gi|118085468|ref|XP_425959.2| PREDICTED: similar t ( 597) 1090 189.5 7.3e-46 gi|149457521|ref|XP_001506265.1| PREDICTED: simila ( 423) 1080 187.7 1.8e-45 gi|126335986|ref|XP_001377332.1| PREDICTED: hypoth ( 950) 951 166.9 7.5e-39 gi|109041344|ref|XP_001108826.1| PREDICTED: simila (2245) 945 166.3 2.6e-38 gi|109484120|ref|XP_236722.4| PREDICTED: similar t ( 729) 920 161.7 2.1e-37 gi|149723934|ref|XP_001502436.1| PREDICTED: simila ( 607) 902 158.6 1.5e-36 gi|109114252|ref|XP_001092787.1| PREDICTED: simila ( 606) 901 158.5 1.6e-36 gi|194676050|ref|XP_873827.3| PREDICTED: similar t ( 608) 901 158.5 1.6e-36 gi|73966293|ref|XP_548190.2| PREDICTED: similar to ( 607) 900 158.3 1.8e-36 gi|114666284|ref|XP_511948.2| PREDICTED: zinc fing ( 585) 897 157.8 2.5e-36 gi|195539641|gb|AAI68022.1| Znf652 protein [Xenopu ( 621) 893 157.2 4.1e-36 gi|119615089|gb|EAW94683.1| zinc finger protein 65 ( 426) 890 156.5 4.5e-36 gi|134035373|sp|Q9Y2D9.3|ZN652_HUMAN RecName: Full ( 606) 890 156.7 5.7e-36 gi|158258771|dbj|BAF85356.1| unnamed protein produ ( 606) 890 156.7 5.7e-36 gi|134035374|sp|Q5DU09.2|ZN652_MOUSE RecName: Full ( 608) 890 156.7 5.7e-36 gi|148684045|gb|EDL15992.1| mCG3800 [Mus musculus] ( 639) 890 156.7 5.9e-36 gi|82184871|sp|Q6INV8.1|Z652B_XENLA RecName: Full= ( 602) 887 156.2 8e-36 gi|134035375|sp|A1L1J6.1|ZN652_RAT RecName: Full=Z ( 608) 886 156.0 9e-36 gi|82184260|sp|Q6GNP2.1|Z652A_XENLA RecName: Full= ( 625) 886 156.0 9.2e-36 gi|189536640|ref|XP_001921275.1| PREDICTED: simila ( 785) 878 154.8 2.7e-35 gi|47223384|emb|CAG04245.1| unnamed protein produc (2137) 871 154.1 1.2e-34 gi|189516901|ref|XP_685749.3| PREDICTED: wu:fi21c1 ( 620) 856 151.1 2.8e-34 gi|189515798|ref|XP_683959.3| PREDICTED: similar t ( 695) 802 142.3 1.4e-31 gi|149018178|gb|EDL76819.1| rCG64117 [Rattus norve ( 121) 759 134.4 5.7e-30 gi|220672947|emb|CAX12010.1| novel zinc finger pro ( 381) 754 134.1 2.2e-29 gi|189518290|ref|XP_001338499.2| PREDICTED: simila ( 487) 465 86.8 5e-15 gi|109039402|ref|XP_001089920.1| PREDICTED: simila ( 113) 447 83.1 1.4e-14 gi|189517588|ref|XP_001923904.1| PREDICTED: hypoth ( 392) 442 82.9 5.9e-14 gi|189518292|ref|XP_683662.3| PREDICTED: similar t ( 361) 441 82.7 6.3e-14 gi|161611628|gb|AAI55812.1| Zgc:175008 protein [Da ( 260) 439 82.2 6.3e-14 gi|73976659|ref|XP_539547.2| PREDICTED: similar to ( 166) 434 81.2 8.2e-14 gi|210111410|gb|EEA59212.1| hypothetical protein B ( 653) 439 82.6 1.2e-13 gi|194666412|ref|XP_589169.3| PREDICTED: similar t ( 472) 437 82.2 1.2e-13 gi|210127523|gb|EEA75205.1| hypothetical protein B ( 573) 438 82.4 1.2e-13 gi|189518355|ref|XP_001346820.2| PREDICTED: simila ( 259) 432 81.1 1.4e-13 gi|47207128|emb|CAF90032.1| unnamed protein produc ( 389) 434 81.6 1.5e-13 gi|189545835|ref|XP_001922541.1| PREDICTED: simila ( 320) 432 81.2 1.6e-13 gi|183985598|gb|AAI66097.1| LOC100158485 protein [ ( 448) 432 81.3 2e-13 gi|189545655|ref|XP_001922771.1| PREDICTED: simila ( 448) 432 81.3 2e-13 gi|189525694|ref|XP_001923317.1| PREDICTED: simila ( 448) 432 81.3 2e-13 gi|189518357|ref|XP_001346819.2| PREDICTED: simila ( 471) 432 81.3 2.1e-13 gi|189533338|ref|XP_001921994.1| PREDICTED: simila ( 383) 430 80.9 2.3e-13 gi|189518298|ref|XP_001919141.1| PREDICTED: simila ( 274) 428 80.4 2.3e-13 gi|189532215|ref|XP_001344155.2| PREDICTED: simila ( 462) 430 81.0 2.6e-13 gi|194209834|ref|XP_001917286.1| PREDICTED: hypoth ( 471) 430 81.0 2.6e-13 >>gi|74761930|sp|Q9UFB7.2|ZBT47_HUMAN RecName: Full=Zinc (371 aa) initn: 1310 init1: 1310 opt: 1310 Z-score: 1177.3 bits: 225.4 E(): 7.1e-57 Smith-Waterman score: 1310; 100.000% identity (100.000% similar) in 174 aa overlap (1-174:198-371) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|747 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 170 180 190 200 210 220 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 230 240 250 260 270 280 100 110 120 130 140 150 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP 290 300 310 320 330 340 160 170 KIAA11 PHLPPPPPLFPTTASPGGRMNANN :::::::::::::::::::::::: gi|747 PHLPPPPPLFPTTASPGGRMNANN 350 360 370 >>gi|34533807|dbj|BAC86810.1| unnamed protein product [H (645 aa) initn: 1310 init1: 1310 opt: 1310 Z-score: 1174.4 bits: 225.7 E(): 1e-56 Smith-Waterman score: 1310; 100.000% identity (100.000% similar) in 174 aa overlap (1-174:472-645) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|345 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 450 460 470 480 490 500 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 510 520 530 540 550 560 100 110 120 130 140 150 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP 570 580 590 600 610 620 160 170 KIAA11 PHLPPPPPLFPTTASPGGRMNANN :::::::::::::::::::::::: gi|345 PHLPPPPPLFPTTASPGGRMNANN 630 640 >>gi|168273192|dbj|BAG10435.1| zinc finger and BTB domai (650 aa) initn: 1310 init1: 1310 opt: 1310 Z-score: 1174.4 bits: 225.7 E(): 1e-56 Smith-Waterman score: 1310; 100.000% identity (100.000% similar) in 174 aa overlap (1-174:477-650) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|168 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 450 460 470 480 490 500 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 510 520 530 540 550 560 100 110 120 130 140 150 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP 570 580 590 600 610 620 160 170 KIAA11 PHLPPPPPLFPTTASPGGRMNANN :::::::::::::::::::::::: gi|168 PHLPPPPPLFPTTASPGGRMNANN 630 640 650 >>gi|67970176|dbj|BAE01432.1| unnamed protein product [M (293 aa) initn: 1272 init1: 1272 opt: 1272 Z-score: 1144.9 bits: 219.1 E(): 4.5e-55 Smith-Waterman score: 1272; 97.126% identity (98.276% similar) in 174 aa overlap (1-174:120-293) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|679 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 90 100 110 120 130 140 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 150 160 170 180 190 200 100 110 120 130 140 150 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP :::::::::::::::::::::::: :::::. :::::::::::::::::::::::::::: gi|679 VCGQRFRFSNMLKAHKEKCFRVSHPLAGDGTSAAPGLPPTQPQAHALPLLPGLPQTLPPP 210 220 230 240 250 260 160 170 KIAA11 PHLPPPPPLFPTTASPGGRMNANN ::::::::::::::. :::::::: gi|679 PHLPPPPPLFPTTAGTGGRMNANN 270 280 290 >>gi|73990353|ref|XP_851976.1| PREDICTED: similar to nat (2045 aa) initn: 1640 init1: 899 opt: 1105 Z-score: 986.4 bits: 192.5 E(): 3.1e-46 Smith-Waterman score: 1105; 86.188% identity (90.055% similar) in 181 aa overlap (1-174:1866-2045) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|739 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 1840 1850 1860 1870 1880 1890 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 1900 1910 1920 1930 1940 1950 100 110 120 130 140 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAA-PGLPPTQPQA-HALPLLPGLPQTLP :::::::::::::::::::::::: ::.:: :.. :::::.:: : :::::::::::::: gi|739 VCGQRFRFSNMLKAHKEKCFRVSHPLAADGPPSSGPGLPPAQPAAAHALPLLPGLPQTLP 1960 1970 1980 1990 2000 2010 150 160 170 KIAA11 ---PPPHLP--PPPPLFPTTASPGGRMNANN : : :: ::. ::. ::::.::: gi|739 TANPVKSXPAAPPAPLL-YTATSGGRMSANN 2020 2030 2040 >>gi|118085468|ref|XP_425959.2| PREDICTED: similar to Zi (597 aa) initn: 904 init1: 904 opt: 1090 Z-score: 979.6 bits: 189.5 E(): 7.3e-46 Smith-Waterman score: 1090; 84.659% identity (89.773% similar) in 176 aa overlap (1-174:426-596) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::.:::::::::::::::::::::::::: gi|118 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFKCENCNERFQYKYQLRSHMSIHIGHKQ 400 410 420 430 440 450 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 460 470 480 490 500 510 100 110 120 130 140 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGD-GVPAAPGLP-PTQPQAHALPLLPGLPQTLP :::::::::::::::::::::::. ::.: .:: . : : : . ::::: :::::: gi|118 VCGQRFRFSNMLKAHKEKCFRVSNPLASDTAVPQPAASPAPLPPGVSPLPLLPPLPQTLP 520 530 540 550 560 570 150 160 170 KIAA11 PPPHLPPPPPLFPTTASPGGRMNANN :::::::::::::. ::.:.:: gi|118 PPPHLPPPPPLFPA-----GRINSNNN 580 590 >>gi|149457521|ref|XP_001506265.1| PREDICTED: similar to (423 aa) initn: 900 init1: 900 opt: 1080 Z-score: 972.5 bits: 187.7 E(): 1.8e-45 Smith-Waterman score: 1080; 85.714% identity (89.143% similar) in 175 aa overlap (1-170:98-270) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|149 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 70 80 90 100 110 120 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 130 140 150 160 170 180 100 110 120 130 140 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPA---AP--GLPPTQPQAHALPLLPGLPQ :::::::::::::::::::::::: ...: :: .: :::: : : : ::: gi|149 VCGQRFRFSNMLKAHKEKCFRVSHPVTSDP-PADGHGPPSGLPPPAPPPPQQLLHP-LPQ 190 200 210 220 230 240 150 160 170 KIAA11 TLPPPPHLPPPPPLFPTTASPGGRMNANN :::: :::::::::::.::.::::: gi|149 TLPPLPHLPPPPPLFPATAGPGGRMEVQADHSGRWAPPQRGACQRTISGVQEAGAAEPRC 250 260 270 280 290 300 >>gi|126335986|ref|XP_001377332.1| PREDICTED: hypothetic (950 aa) initn: 884 init1: 884 opt: 951 Z-score: 853.8 bits: 166.9 E(): 7.5e-39 Smith-Waterman score: 951; 81.212% identity (84.242% similar) in 165 aa overlap (1-157:789-948) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::.:::::::::::::::::::::::::: gi|126 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFKCENCNERFQYKYQLRSHMSIHIGHKQ 760 770 780 790 800 810 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 820 830 840 850 860 870 100 110 120 130 140 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGD---GVPAAPGLP----PTQP-QAHALPLLPG :::::::::::::::::::::::: ...: : ::: :. : : : : :: gi|126 VCGQRFRFSNMLKAHKEKCFRVSHPMTSDTPDGGDHPPGLTLALTPVPPGAAPATPTQPG 880 890 900 910 920 930 150 160 170 KIAA11 LPQTLPPPPHLPPPPPLFPTTASPGGRMNANN :: :: : :::: gi|126 LP---PPQP--PPPPHT 940 950 >>gi|109041344|ref|XP_001108826.1| PREDICTED: similar to (2245 aa) initn: 861 init1: 861 opt: 945 Z-score: 843.9 bits: 166.3 E(): 2.6e-38 Smith-Waterman score: 945; 73.889% identity (83.889% similar) in 180 aa overlap (1-174:2066-2245) 10 20 KIAA11 KPFRCENCNERFQYKYQLR-SHMSIHIGHK :::::: :. .. :.. ::. : : gi|109 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCEVCSPSWDSLYSVAFSHFLTSIPHL 2040 2050 2060 2070 2080 2090 30 40 50 60 70 80 KIAA11 QFMCQWCGKDFNMK---QY--FDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGE .. : : :.:.. . .: . . .::::::::::::::::::::::::::::::: gi|109 SLGCLWVGEDLSARAGSNYGSMGDGGWPQTGEKPYICEICGKSFTSRPNMKRHRRTHTGE 2100 2110 2120 2130 2140 2150 90 100 110 120 130 140 KIAA11 KPYPCDVCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLP :::::::::::::::::::::::::::::: :::::. :::::::::::::::::::::: gi|109 KPYPCDVCGQRFRFSNMLKAHKEKCFRVSHPLAGDGTSAAPGLPPTQPQAHALPLLPGLP 2160 2170 2180 2190 2200 2210 150 160 170 KIAA11 QTLPPPPHLPPPPPLFPTTASPGGRMNANN ::::::::::::::::::::. :::::::: gi|109 QTLPPPPHLPPPPPLFPTTAGTGGRMNANN 2220 2230 2240 >>gi|109484120|ref|XP_236722.4| PREDICTED: similar to zi (729 aa) initn: 1098 init1: 884 opt: 920 Z-score: 827.7 bits: 161.7 E(): 2.1e-37 Smith-Waterman score: 920; 87.755% identity (89.796% similar) in 147 aa overlap (1-147:585-726) 10 20 30 KIAA11 KPFRCENCNERFQYKYQLRSHMSIHIGHKQ :::::::::::::::::::::::::::::: gi|109 KDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSHMSIHIGHKQ 560 570 580 590 600 610 40 50 60 70 80 90 KIAA11 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCD 620 630 640 650 660 670 100 110 120 130 140 150 KIAA11 VCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLPGLPQTLPPP :::::::::::::::::::::::: : :: ::. :: :. : : ::.: : : gi|109 VCGQRFRFSNMLKAHKEKCFRVSHPLPGD--PAS--LPATHLQPTA-PLFPTAPPRLDTN 680 690 700 710 720 160 170 KIAA11 PHLPPPPPLFPTTASPGGRMNANN 174 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 01:42:46 2009 done: Wed Mar 4 01:48:34 2009 Total Scan time: 1101.070 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]