hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19473033/chunk_1/iprscan-20080501-19473033.nocrc
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Query sequence: KIAA1187
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05672.2.ls MAP7 (E-MAP-115) family                        331.6    1.3e-96   1
PF05672.2.fs MAP7 (E-MAP-115) family                        329.8    4.3e-96   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05672.2.fs   1/1     549   708 ..     1   193 []   329.8  4.3e-96
PF05672.2.ls   1/1     549   708 ..     1   193 []   331.6  1.3e-96

Alignments of top-scoring domains:
PF05672.2.fs: domain 1 of 1, from 549 to 708: score 329.8, E = 4.3e-96
                   *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr
                      +P+++++++++sKp+AGTTD+eEAtrLLAEKRRqAReQrE+EEqERr
    KIAA1187   549    SPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERR 595  

                   eqeErdrrkREElkrraaEeRtlrrEeEARrrEeeraRekeekKKqEGEE
                   +q+Erd+r+REE+++r+aE+R ++rE+EARrrEe++aRek+++       
    KIAA1187   596 LQAERDKRMREEQLAREAEAR-AEREAEARRREEQEAREKAQA------- 637  

                   KRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEaraREeAErv
                                         EqEeqEr  +qkQKEeAEar+REeAEr+
    KIAA1187   638 ----------------------EQEEQER--LQKQKEEAEARSREEAERQ 663  

                   RlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDskeG<-*
                   RlEREkhfqq+EQER+ER+KRLeEIMKRTRksevse+ Kk+Dske    
    KIAA1187   664 RLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSET-KKQDSKEA    708  

PF05672.2.ls: domain 1 of 1, from 549 to 708: score 331.6, E = 1.3e-96
                   *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr
                      +P+++++++++sKp+AGTTD+eEAtrLLAEKRRqAReQrE+EEqERr
    KIAA1187   549    SPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERR 595  

                   eqeErdrrkREElkrraaEeRtlrrEeEARrrEeeraRekeekKKqEGEE
                   +q+Erd+r+REE+++r+aE+R ++rE+EARrrEe++aRek+++       
    KIAA1187   596 LQAERDKRMREEQLAREAEAR-AEREAEARRREEQEAREKAQA------- 637  

                   KRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEaraREeAErv
                                         EqEeqEr  +qkQKEeAEar+REeAEr+
    KIAA1187   638 ----------------------EQEEQER--LQKQKEEAEARSREEAERQ 663  

                   RlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDskeG<-*
                   RlEREkhfqq+EQER+ER+KRLeEIMKRTRksevse+ Kk+Dske    
    KIAA1187   664 RLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSET-KKQDSKEA    708  

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