hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19455399/chunk_1/iprscan-20080501-19455399.nocrc
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Query sequence: KIAA1186
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00650.10.fs CRAL/TRIO domain                            152.0    1.5e-44   1
PF00650.10.ls CRAL/TRIO domain                            150.9      3e-42   1
PF01105.14.fs emp24/gp25L/p24 family/GOLD                  93.1    2.1e-28   1
PF01105.14.ls emp24/gp25L/p24 family/GOLD                  95.1      2e-25   1
PF03765.5.fs CRAL/TRIO, N-terminus                        44.9    4.6e-13   1
PF03765.5.ls CRAL/TRIO, N-terminus                        46.7    7.2e-11   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF03765.5.fs   1/1       5    73 ..     1    89 []    44.9  4.6e-13
PF03765.5.ls   1/1       5    73 ..     1    89 []    46.7  7.2e-11
PF00650.10.fs   1/1      87   246 ..     1   161 [.   152.0  1.5e-44
PF00650.10.ls   1/1      87   282 ..     1   188 []   150.9    3e-42
PF01105.14.fs   1/1     299   385 ..     1    92 []    93.1  2.1e-28
PF01105.14.ls   1/1     299   385 ..     1    92 []    95.1    2e-25

Alignments of top-scoring domains:
PF03765.5.fs: domain 1 of 1, from 5 to 73: score 44.9, E = 4.6e-13
                   *->gtpgnltpeqeraykskLkeetLkelryelseknkteeldkgykerl
                      g+ g l+p q         +e+L+++r++++        d+  + + 
    KIAA1186     5    GRVGDLSPRQ---------KEALAKFRENVQ--------DVLPALPN 34   

                   kawldDatlLRFLRARKFdvaaAiemltktlkWRrEfGvnei<-*
                      +dD +lLR LRAR Fd++++  ml+k +++R++  ++ i   
    KIAA1186    35 ---PDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNI    73   

PF03765.5.ls: domain 1 of 1, from 5 to 73: score 46.7, E = 7.2e-11
                   *->gtpgnltpeqeraykskLkeetLkelryelseknkteeldkgykerl
                      g+ g l+p q         +e+L+++r++++        d+  + + 
    KIAA1186     5    GRVGDLSPRQ---------KEALAKFRENVQ--------DVLPALPN 34   

                   kawldDatlLRFLRARKFdvaaAiemltktlkWRrEfGvnei<-*
                      +dD +lLR LRAR Fd++++  ml+k +++R++  ++ i   
    KIAA1186    35 ---PDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNI    73   

PF00650.10.fs: domain 1 of 1, from 87 to 246: score 152.0, E = 1.5e-44
                   *->pqfihgtdkdGrpvylekrGklntkvmlkittlhrmlkklvyeverl
                       +   g+d dG pv +   G+l++k++l+ ++++++l  ++   ++l
    KIAA1186    87    SGGMCGYDLDGCPVWYDIIGPLDAKGLLF-SASKQDLLRTKMRECEL 132  

                   tlyrlpaasrklgtlingsctvfDlkGvsmssmaspvlsvlkkvinilqd
                   +l+  + ++ klg  ++++++++D +G++++++++p +  + + + +++ 
    KIAA1186   133 LLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEE 182  

                   yYPErlgkfylinaPwlFstvyklIKpFLDektrsKifvlGssYkeeLlk
                   +YPE+l+++++++aP lF+++y+lIKpFL+e+tr+Ki+vlG + ke Llk
    KIAA1186   183 NYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLK 232  

                   hipaenLPakfGGt<-*
                   hi +++ P ++GGt   
    KIAA1186   233 HISPDQVPVEYGGT    246  

PF00650.10.ls: domain 1 of 1, from 87 to 282: score 150.9, E = 3e-42
                   *->pqfihgtdkdGrpvylekrGklntkvmlkittlhrmlkklvyeverl
                       +   g+d dG pv +   G+l++k++l+ ++++++l  ++   ++l
    KIAA1186    87    SGGMCGYDLDGCPVWYDIIGPLDAKGLLF-SASKQDLLRTKMRECEL 132  

                   tlyrlpaasrklgtlingsctvfDlkGvsmssmaspvlsvlkkvinilqd
                   +l+  + ++ klg  ++++++++D +G++++++++p +  + + + +++ 
    KIAA1186   133 LLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEE 182  

                   yYPErlgkfylinaPwlFstvyklIKpFLDektrsKifvlGssYkeeLlk
                   +YPE+l+++++++aP lF+++y+lIKpFL+e+tr+Ki+vlG + ke Llk
    KIAA1186   183 NYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLK 232  

                   hipaenLPakfGGt.........lktkydkcgvwlsdvgpwrdeeqigfe
                   hi +++ P ++GGt +++++++++k+k +++g  + ++  +++++q ++ 
    KIAA1186   233 HISPDQVPVEYGGTmtdpdgnpkCKSKINYGGDIPRKYYVRDQVKQQYEH 282  

                   <-*
                      
    KIAA1186     -     -    

PF01105.14.fs: domain 1 of 1, from 299 to 385: score 93.1, E = 2.1e-28
                   *->eeggstlsWefrtgdldidfgiyfsktecvsedeevhtspdgpvihs
                       ++g++l+W+f++++ d++fgi+ ++ + +++ +++ + ++ p  ++
    KIAA1186   299    LFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGE-MTEVLPNQRY 344  

                   eskkssgevidfsFtapepGeYklCFdNsyStftsKtvrfielev<-*
                   +s+ +++   d+++t+++pG+Y+l FdN+yS ++ K+v f ++ev   
    KIAA1186   345 NSHLVPE---DGTLTCSDPGIYVLRFDNTYSFIHAKKVNF-TVEV    385  

PF01105.14.ls: domain 1 of 1, from 299 to 385: score 95.1, E = 2e-25
                   *->eeggstlsWefrtgdldidfgiyfsktecvsedeevhtspdgpvihs
                       ++g++l+W+f++++ d++fgi+ ++ + +++ +++ + ++ p  ++
    KIAA1186   299    LFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGE-MTEVLPNQRY 344  

                   eskkssgevidfsFtapepGeYklCFdNsyStftsKtvrfielev<-*
                   +s+ +++   d+++t+++pG+Y+l FdN+yS ++ K+v f ++ev   
    KIAA1186   345 NSHLVPE---DGTLTCSDPGIYVLRFDNTYSFIHAKKVNF-TVEV    385  

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